Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Apply filters to VCF file

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/filter_vcf_mouse.cwl

Branch/Commit ID: ffd73951157c61c1581d346628d75b61cdd04141
workflow graph no-inputs-wf.cwl

Workflow without inputs.

 https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/no-inputs-wf.cwl

Branch/Commit ID: e67f19d8a713759d761ecad050966d1eb043b85c
workflow graph io-file-default-wf.cwl

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/io-file-default-wf.cwl

Branch/Commit ID: e67f19d8a713759d761ecad050966d1eb043b85c
workflow graph Subworkflow to allow calling cnvkit with cram instead of bam files

https://github.com/fgomez02/analysis-workflows.git

Path: definitions/subworkflows/cram_to_cnvkit.cwl

Branch/Commit ID: 9c9e6a6a48eb321804ce772a2c2c12b4f2f32529
workflow graph Chipseq alignment with qc and creating homer tag directory

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/chipseq.cwl

Branch/Commit ID: f0cdc773e31e4aa116838e8aba4954c31bd3d68b
workflow graph Single-Cell Preprocessing Cell Ranger Pipeline

Devel version of Single-Cell Preprocessing Cell Ranger Pipeline ===============================================================

 https://github.com/datirium/workflows.git

Path: workflows/single-cell-preprocess-cellranger.cwl

Branch/Commit ID: 4360fb2e778ecee42e5f78f83b78c65ab3a2b1df
workflow graph Detect DoCM variants

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/docm_germline.cwl

Branch/Commit ID: ffd73951157c61c1581d346628d75b61cdd04141
workflow graph downsample unaligned BAM and align

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/downsampled_alignment.cwl

Branch/Commit ID: 700e73aaed6db1ad538dd27b2e1709f436ad3edb
workflow graph scatter-wf4.cwl#main

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/scatter-wf4.cwl

Branch/Commit ID: 814bd0405a7701efc7d63e8f0179df394c7766f7

Packed ID: main
workflow graph fastqPE2bam.cwl

https://github.com/ddbj/human-reseq.git

Path: Workflows/fastqPE2bam.cwl

Branch/Commit ID: a1c9cd63c80122d6a831059cdb73ec9a9455af6f