Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	exome alignment and germline variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/germline_detect_variants.cwl Branch/Commit ID: ddd748516b25256a461ea9277303406fa2759b00
	cluster_blastp_wnode and gpx_qdump combined	https://github.com/ncbi/pgap.git Path: task_types/tt_cluster_and_qdump.cwl Branch/Commit ID: f76a7f4a81ef4e60fa9a3964445162c92bf3d57c
	01-qc-se.cwl RNA-seq 01 QC - reads: SE	https://github.com/alexbarrera/GGR-cwl.git Path: v1.0/RNA-seq_pipeline/01-qc-se.cwl Branch/Commit ID: 33385c6a820a9d4d18cff6fc3a533ec8e3c11c6e
	cluster_blastp_wnode and gpx_qdump combined	https://github.com/ncbi/pgap.git Path: task_types/tt_cluster_and_qdump.cwl Branch/Commit ID: e71779665f42fcf34601b0f65e030bb0dd47fa79
	Run pindel on provided region	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel_region.cwl Branch/Commit ID: ddd748516b25256a461ea9277303406fa2759b00
	Per-region pindel	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel_cat.cwl Branch/Commit ID: 441b85003fdc10cf4cbf333d89acb4d23b0fef32
	wgetkegg_wf.cwl	https://github.com/manabuishii/wgetkegg.git Path: wgetkegg_wf.cwl Branch/Commit ID: 4a06d046afb651b9bdebf7ea2c0fdead89dced24
	exome alignment and germline variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/germline_exome.cwl Branch/Commit ID: a670f323e77e02d9b77be9a13d73d5276dd3676c
	Prepare user input Prepare user input for NCBI-PGAP pipeline	https://github.com/ncbi/pgap.git Path: prepare_user_input2.cwl Branch/Commit ID: e71779665f42fcf34601b0f65e030bb0dd47fa79
	hmmsearch_wnode and gpx_qdump combined workflow to apply scatter/gather	https://github.com/ncbi/pgap.git Path: task_types/tt_hmmsearch_wnode_plus_qdump.cwl Branch/Commit ID: 7e875f77b615b4f7ebfb23a1da30eb216cc52919