Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Dockstore.cwl
This is a description |
https://github.com/KTest-Organization/github-apps-workflow.git
Path: Dockstore.cwl Branch/Commit ID: master |
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canine_add_rna_header_to_vcf_module.cwl
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https://github.com/d3b-center/canine-dev.git
Path: subworkflows/canine_add_rna_header_to_vcf_module.cwl Branch/Commit ID: master |
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hello_world_checker.cwl
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https://github.com/dockstore/hello_world.git
Path: hello_world_checker.cwl Branch/Commit ID: 1.03 |
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batch-preprocess-ont.cwl
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https://github.com/fjrmoreews/cwl-workflow-SARS-CoV-2.git
Path: PreProcessing/batch-preprocess-ont.cwl Branch/Commit ID: preprocessing |
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main-vg.cwl
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https://github.com/bio-ontology-research-group/pangenome.git
Path: workflows/variant-calling/main-vg.cwl Branch/Commit ID: main |
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collate_unique_rRNA_headers.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/collate_unique_rRNA_headers.cwl Branch/Commit ID: 0fed1c9 |
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metabarcode (gene amplicon) analysis for fastq files
protein - qc, preprocess, annotation, index, abundance |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/metabarcode-fastq.workflow.cwl Branch/Commit ID: master |
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sc_atac_seq_prep_process_analyze.cwl
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https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git
Path: sc_atac_seq_prep_process_analyze.cwl Branch/Commit ID: 7fed36f |
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preprocess.cwl
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https://github.com/inutano/covid19-phylogeny.git
Path: cwl/preprocessing/preprocess.cwl Branch/Commit ID: cwl |
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pcawg_minibam_wf.cwl
This workflow will run OxoG, variantbam, and annotate. Run this as `dockstore --script --debug workflow launch --descriptor cwl --local-entry --entry ./oxog_varbam_annotate_wf.cwl --json oxog_varbam_annotat_wf.input.json ` |
https://github.com/icgc-tcga-pancancer/pcawg-minibam.git
Path: pcawg_minibam_wf.cwl Branch/Commit ID: 1.0.0 |
