Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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gathered exome alignment and somatic variant detection for cle purpose
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https://github.com/apaul7/cancer-genomics-workflow.git
Path: definitions/pipelines/somatic_exome_cle_gathered.cwl Branch/Commit ID: low-vaf |
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bacterial_orthology
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https://github.com/ncbi/pgap.git
Path: bacterial_orthology/wf_bacterial_orthology.cwl Branch/Commit ID: dev |
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qiime2 DADA2 detect/correct sequence data
Option 1: DADA2 from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/ |
https://github.com/Duke-GCB/bespin-cwl.git
Path: packed/qiime2-step2-dada2.cwl Branch/Commit ID: qiime2-workflow Packed ID: qiime2-03-dada2.cwl |
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Hello World
Outputs a message using echo |
https://github.com/YangYang-Lcos/legacy.git
Path: workflows/hello/hell_17.cwl Branch/Commit ID: master |
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dynresreq-workflow-inputdefault.cwl
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/dynresreq-workflow-inputdefault.cwl Branch/Commit ID: master |
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example_workflow.cwl
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https://github.com/Aeolic/example-workflow.git
Path: example_workflow.cwl Branch/Commit ID: main |
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sc_atac_seq_prep_process_analyze.cwl
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https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git
Path: sc_atac_seq_prep_process_analyze.cwl Branch/Commit ID: 06aeffe |
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EMG pipeline v3.0 (paired end version)
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https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git
Path: workflows/emg-pipeline-v3-paired.cwl Branch/Commit ID: ca6ca613 |
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umi duplex alignment workflow
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https://github.com/tmooney/cancer-genomics-workflow.git
Path: definitions/subworkflows/duplex_alignment.cwl Branch/Commit ID: downsample_and_recall |
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SetParameterWorkflowMissing
This is a placeholder for a missing setting workflow. |
https://github.com/gammasim/workflows.git
Path: workflows/SetParameterWorkflowMissing.cwl Branch/Commit ID: main |
