Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Detect Docm variants	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/docm_cle.cwl Branch/Commit ID: 68eda647259849ca81ac0bb07a24bc8a4465a630
	VIRTUS.SE.cwl	https://github.com/yyoshiaki/VIRTUS.git Path: workflow/VIRTUS.SE.cwl Branch/Commit ID: ff8ca6c87ad2c8fa2d1bc9a8bb4bca9c523826d6
	Subworkflow that runs cnvkit in single sample mode and returns a vcf file	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cnvkit_single_sample.cwl Branch/Commit ID: 00df82a529a58d362158110581e1daa28b4d7ecb
	Detect Docm variants	https://github.com/tmooney/cancer-genomics-workflow.git Path: definitions/subworkflows/docm_cle.cwl Branch/Commit ID: 233f026ffce240071edda526391be0c03186fce8
	echo-wf-default.cwl	https://github.com/common-workflow-language/cwl-v1.1.git Path: tests/echo-wf-default.cwl Branch/Commit ID: 368b562a1449e8cd39ae8b7f05926b2bfb9b22df
	align_sort_sa	https://github.com/ncbi/pgap.git Path: task_types/tt_align_sort_sa.cwl Branch/Commit ID: 3384fa5776c183d33bef830696b6edc6ec55a292
	PCA - Principal Component Analysis Principal Component Analysis --------------- Principal component analysis (PCA) is a statistical procedure that uses an orthogonal transformation to convert a set of observations of possibly correlated variables (entities each of which takes on various numerical values) into a set of values of linearly uncorrelated variables called principal components. The calculation is done by a singular value decomposition of the (centered and possibly scaled) data matrix, not by using eigen on the covariance matrix. This is generally the preferred method for numerical accuracy.	https://github.com/datirium/workflows.git Path: workflows/pca.cwl Branch/Commit ID: b957a4f681bf0ca8ebba4e0d0ec3936bf79620c5
	Subworkflow to allow calling different SV callers which require bam files as inputs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/single_sample_sv_callers.cwl Branch/Commit ID: 68eda647259849ca81ac0bb07a24bc8a4465a630
	kmer_top_n_extract	https://github.com/ncbi-gpipe/pgap.git Path: task_types/tt_kmer_top_n_extract.cwl Branch/Commit ID: 33414c888997d558bdcb558ca33c3a728a3e6143
	extract_gencoll_ids	https://github.com/ncbi/pgap.git Path: task_types/tt_extract_gencoll_ids.cwl Branch/Commit ID: 041a234a935c7af7d3db95353ef80c61c88fc010