Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
cram_to_bam workflow
|
https://github.com/genome/cancer-genomics-workflow.git
Path: cram_to_bam/workflow.cwl Branch/Commit ID: be7e682c6a2d0b24b949e022aeae7786bd8434ed |
|
|
|
strelka workflow
|
https://github.com/genome/cancer-genomics-workflow.git
Path: strelka/workflow.cwl Branch/Commit ID: ab3cc1f460146c60d7de417508f0c1ea70506e6a |
|
|
|
Varscan Workflow
|
https://github.com/genome/cancer-genomics-workflow.git
Path: varscan/workflow.cwl Branch/Commit ID: ab3cc1f460146c60d7de417508f0c1ea70506e6a |
|
|
|
Apply filters to VCF file
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/filter_vcf.cwl Branch/Commit ID: 8c4e7372247a7f4ed9ed478ef8ea1d239bc88af0 |
|
|
|
Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pvacseq.cwl Branch/Commit ID: 7638b3075863ae8172f4adaec82fb2eb8e80d3d5 |
|
|
|
default-wf5.cwl
|
https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/default-wf5.cwl Branch/Commit ID: 2710cfe731374cf7244116dd7186fc2b6e4af344 |
|
|
|
kmer_cache_retrieve
|
https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_cache_retrieve.cwl Branch/Commit ID: 953d7866bc70e14c02a6bb8c5a72305caa823bfc |
|
|
|
Merge, annotate, and generate a TSV for SVs
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/merge_svs.cwl Branch/Commit ID: 7638b3075863ae8172f4adaec82fb2eb8e80d3d5 |
|
|
|
apolloServer-createOrganism-workflow.cwl
|
https://github.com/NAL-i5K/Organism_Onboarding.git
Path: apolloServer-createOrganism-workflow.cwl Branch/Commit ID: 0b58c250e8ab7c5efae29443f08ea74316127041 |
|
|
|
format_rrnas_from_seq_entry
|
https://github.com/ncbi/pgap.git
Path: task_types/tt_format_rrnas_from_seq_entry.cwl Branch/Commit ID: af78bfbc7625a817a2875e87c8ee267cf46b8c57 |
