Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	01-qc-se.cwl RNA-seq 01 QC - reads: SE	https://github.com/alexbarrera/GGR-cwl.git Path: v1.0/RNA-seq_pipeline/01-qc-se.cwl Branch/Commit ID: 1a0dd34d59ec983d1f7ad77bff35da2f016e3134
	Bacterial Annotation, pass 3, structural annotation, functional annotation: ab initio GeneMark, by WP, by HMM (second pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass3.cwl Branch/Commit ID: e2a6cbcc36212433d8fbc804919442787a5e2a49
	align_merge_sas	https://github.com/ncbi/pgap.git Path: task_types/tt_align_merge_sas.cwl Branch/Commit ID: 75ea689c0a8c9902b4598b453455857cb08e885a
	cache_asnb_entries	https://github.com/ncbi/pgap.git Path: task_types/tt_cache_asnb_entries.cwl Branch/Commit ID: 75ea689c0a8c9902b4598b453455857cb08e885a
	WGS QC workflow nonhuman	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/qc_wgs_nonhuman.cwl Branch/Commit ID: 43c790e2ee6a0f3f42e40fb4d9a9005eb8de747a
	idr.cwl	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/ChIP-Seq/idr.cwl Branch/Commit ID: 793e327acc1d159ff601043ee88651fca62350dd
	allele-process-strain.cwl	https://github.com/datirium/workflows.git Path: subworkflows/allele-process-strain.cwl Branch/Commit ID: 3ceeb2e90f49579369b2e10485908516348381a9
	workflow-blast-ebeye-pdbe.cwl	https://github.com/ebi-wp/webservice-cwl.git Path: workflows/workflow-blast-ebeye-pdbe.cwl Branch/Commit ID: f867131c9646cde56828c4d8999114f5ca958be9
	Running cellranger count and lineage inference	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/single_cell_rnaseq.cwl Branch/Commit ID: 7638b3075863ae8172f4adaec82fb2eb8e80d3d5
	qc_aggregator	https://github.com/msk-access/qc_generation.git Path: access_qc__packed.cwl Branch/Commit ID: 248e7c3edaff48e1b97a7931d66aa3b23ce97f54 Packed ID: qc_aggregator.cwl