Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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01-qc-pe.cwl
RNA-seq 01 QC - reads: PE |
https://github.com/Duke-GCB/GGR-cwl.git
Path: v1.0/RNA-seq_pipeline/01-qc-pe.cwl Branch/Commit ID: 487af88ef0b971f76ecd1a215639bb47e3ee94e1 |
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js_output_workflow.cwl
|
https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/js_output_workflow.cwl Branch/Commit ID: 78fe9d41ee5a44f8725dfbd7028e4a5ee42949cf |
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Per-region pindel
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pindel_cat.cwl Branch/Commit ID: 7638b3075863ae8172f4adaec82fb2eb8e80d3d5 |
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umi molecular alignment workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/molecular_alignment.cwl Branch/Commit ID: 43c790e2ee6a0f3f42e40fb4d9a9005eb8de747a |
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01-qc-pe.cwl
ATAC-seq 01 QC - reads: PE |
https://github.com/Duke-GCB/GGR-cwl.git
Path: v1.0/ATAC-seq_pipeline/01-qc-pe.cwl Branch/Commit ID: 487af88ef0b971f76ecd1a215639bb47e3ee94e1 |
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scRNA-seq pipeline using Salmon and Alevin
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https://github.com/hubmapconsortium/salmon-rnaseq.git
Path: pipeline.cwl Branch/Commit ID: 81c13b4aee9478370116ceb5c933c8a4427a6030 |
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01-qc-se.cwl
RNA-seq 01 QC - reads: SE |
https://github.com/Duke-GCB/GGR-cwl.git
Path: v1.0/RNA-seq_pipeline/01-qc-se.cwl Branch/Commit ID: 487af88ef0b971f76ecd1a215639bb47e3ee94e1 |
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Bisulfite alignment and QC
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/bisulfite.cwl Branch/Commit ID: 43c790e2ee6a0f3f42e40fb4d9a9005eb8de747a |
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fp_filter workflow
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https://github.com/genome/cancer-genomics-workflow.git
Path: fp_filter/workflow.cwl Branch/Commit ID: be7e682c6a2d0b24b949e022aeae7786bd8434ed |
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05-quantification-with-control.cwl
ChIP-seq - Quantification - samples: treatment and control |
https://github.com/Duke-GCB/GGR-cwl.git
Path: v1.0/ChIP-seq_pipeline/05-quantification-with-control.cwl Branch/Commit ID: 487af88ef0b971f76ecd1a215639bb47e3ee94e1 |