Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph coverage.cwl

https://github.com/EBI-Metagenomics/CWL-assembly.git

Path: tools/stats/coverage.cwl

Branch/Commit ID: 6d5695af158f4513ce383bb2b15319449f7ddb07
workflow graph readgroup_fastq_se.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/readgroup_fastq_se.cwl

Branch/Commit ID: cf2e9d7c3cc87ce97a1fbf73fad574b170fedcfb
workflow graph Functional analyis of sequences that match the 16S SSU

https://github.com/FarahZKhan/ebi-metagenomics-cwl.git

Path: workflows/16S_taxonomic_analysis.cwl

Branch/Commit ID: bcfe5f9affd23d52467f69b4b21d1098f0ca95d7
workflow graph wf_exec_paleocar.cwl

https://github.com/idaks/cwl_modeling.git

Path: yw_cwl_modeling/yw_cwl_parser_old/Examples/exec_paleocar/wf_exec_paleocar.cwl

Branch/Commit ID: cd1454539fc62c7a9a66de56459610728dec8baa
workflow graph readgroup_fastq_pe.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/readgroup_fastq_pe.cwl

Branch/Commit ID: cf2e9d7c3cc87ce97a1fbf73fad574b170fedcfb
workflow graph qa_check_subwf.cwl

This subworkflow will perform a QA check on the OxoG outputs. It will perform the QA check on a single tumour and it associated VCFs

https://github.com/ICGC-TCGA-PanCancer/OxoG-Dockstore-Tools.git

Path: qa_check_subwf.cwl

Branch/Commit ID: 6366ed398da10019b6d81a789291af6d909f28f4
workflow graph kfdrc_cram_to_gvcf.cwl

https://github.com/kids-first/kf-alignment-workflow.git

Path: workflows/kfdrc_cram_to_gvcf.cwl

Branch/Commit ID: b8b1a96d015db74ea451bb7bf83a5e48e645ce1f
workflow graph metaspades_pipeline.cwl

https://github.com/EBI-Metagenomics/CWL-assembly.git

Path: tools/metaspades_pipeline.cwl

Branch/Commit ID: 6d5695af158f4513ce383bb2b15319449f7ddb07
workflow graph integrity.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/integrity.cwl

Branch/Commit ID: cf2e9d7c3cc87ce97a1fbf73fad574b170fedcfb
workflow graph conditional_bamindex.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/conditional_bamindex.cwl

Branch/Commit ID: cf2e9d7c3cc87ce97a1fbf73fad574b170fedcfb