Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph downsample unaligned BAM and align

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/subworkflows/downsampled_alignment.cwl

Branch/Commit ID: downsample_and_recall
workflow graph scatter-valuefrom-wf3.cwl#main

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/scatter-valuefrom-wf3.cwl

Branch/Commit ID: master

Packed ID: main
workflow graph dna.cwl#main

https://github.com/common-workflow-library/legacy.git

Path: workflows/make-to-cwl/dna.cwl

Branch/Commit ID: master

Packed ID: main
workflow graph abc-enhancer-gene-prediction

## Activity by Contact Model of Enhancer-Gene Specificity in Common Workflow Language [broadinstitute/ABC-Enhancer-Gene-Prediction: Cell type specific enhancer-gene predictions using ABC model (Fulco, Nasser et al, Nature Genetics 2019)](https://github.com/broadinstitute/ABC-Enhancer-Gene-Prediction)

 https://github.com/davidroberson/workflow-notebooks.git

Path: abc_enhancer_gene_prediction/abc-enchancer-gene-prediction-wf.cwl

Branch/Commit ID: main
workflow graph workflow-fetch-hmmscan.cwl

https://github.com/ebi-jdispatcher/webservice-cwl.git

Path: workflows/workflow-fetch-hmmscan.cwl

Branch/Commit ID: master
workflow graph geogrid_workflow.cwl

https://github.com/UoMResearchIT/wrf_emep_cwl_linear_workflow.git

Path: workflows/geogrid_workflow.cwl

Branch/Commit ID: develop
workflow graph EMG assembly for paired end Illumina

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-assembly.cwl

Branch/Commit ID: fa86fce
workflow graph scatter GATK HaplotypeCaller over intervals

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/subworkflows/gatk_haplotypecaller_iterator.cwl

Branch/Commit ID: low-vaf
workflow graph snaptools_create_snap_file.cwl

https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git

Path: steps/snaptools_create_snap_file.cwl

Branch/Commit ID: 302f1f3
workflow graph md5sum.cwl

https://github.com/briandoconnor/dockstore-workflow-md5sum-tester.git

Path: md5sum/md5sum.cwl

Branch/Commit ID: develop