Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph steps.cwl

https://github.com/tobiaszjarosiewicz/cwl_test.git

Path: steps.cwl

Branch/Commit ID: master
workflow graph bam2vcf.cwl

https://github.com/nigyta/rice_reseq.git

Path: workflows/bam2vcf.cwl

Branch/Commit ID: master
workflow graph plant2human_v3_stringent.cwl

https://github.com/yonesora56/plant2human.git

Path: Workflow/plant2human_v3_stringent.cwl

Branch/Commit ID: main
workflow graph Find reads with predicted coding sequences above 60 AA in length

https://github.com/farahzkhan/ebi-metagenomics-cwl.git

Path: workflows/orf_prediction.cwl

Branch/Commit ID: master
workflow graph scRNA-seq pipeline using Salmon and Alevin

https://github.com/hubmapconsortium/salmon-rnaseq.git

Path: pipeline.cwl

Branch/Commit ID: d18fd49
workflow graph scatter-valuefrom-wf5.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/scatter-valuefrom-wf5.cwl

Branch/Commit ID: main
workflow graph Hello World

Puts a message into a file using echo

 https://github.com/markrobbo/workflows.git

Path: workflows/hello/hello.cwl

Branch/Commit ID: master

Packed ID: main
workflow graph step2: trimming fastq files (single-end)

multiple fastq files trimming process using fastp version 0.23.4 and scatter feature requirement

 https://github.com/RyoNozu/CWL4IncorporateTSSintoGXF.git

Path: workflow/01_trimming_fastq_subworkflow_se.cwl

Branch/Commit ID: main
workflow graph Runs InterProScan on batches of sequences to retrieve functional annotations.

https://github.com/mscheremetjew/workflow-is-cwl.git

Path: workflows/InterProScan-v5-chunked-wf.cwl

Branch/Commit ID: assembly
workflow graph List ZIP content for zenodo community

For a given Zenodo community, list file content of its downloadable *.zip files

https://github.com/stain/ro-index-paper.git

Path: code/data-gathering/workflows/zenodo-zip-content.cwl

Branch/Commit ID: master