Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
---|---|---|---|
Exome QC workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/qc_exome_no_verify_bam.cwl Branch/Commit ID: 2e298960837739717ec2928a99c5d811183012e6 |
||
count-lines13-wf.cwl
|
https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/count-lines13-wf.cwl Branch/Commit ID: 4d06b9efd26c5813c13684ebcc95547bb75ddfcc |
||
Exome QC workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/qc_exome_no_verify_bam.cwl Branch/Commit ID: 0b6e8fd8ead7644cf5398395b76af5cf4011686f |
||
BioExcel-CWL-firstWorkflow.cwl
|
https://github.com/bioexcel/biobb_wf_cwl_tutorial.git
Path: biobb_wf_cwl_tutorial/examples/BioExcel-CWL-firstWorkflow.cwl Branch/Commit ID: d760a4e30c0838376ebbbf3110bda824544b89aa |
||
Unaligned bam to sorted, markduped bam
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/align_sort_markdup.cwl Branch/Commit ID: 2e298960837739717ec2928a99c5d811183012e6 |
||
bam to trimmed fastqs and biscuit alignments
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_trimmed_fastq_and_biscuit_alignments.cwl Branch/Commit ID: d3e4bf55753cd92f97537c7d701187ea92d1e5f0 |
||
gcaccess_from_list
|
https://github.com/ncbi-gpipe/pgap.git
Path: task_types/tt_gcaccess_from_list.cwl Branch/Commit ID: a539d600357a48a558daf43fc41a89aae79f9e86 |
||
downsample unaligned BAM and align
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/downsampled_alignment.cwl Branch/Commit ID: f0cdc773e31e4aa116838e8aba4954c31bd3d68b |
||
protein_extract
|
https://github.com/ncbi/pgap.git
Path: progs/protein_extract.cwl Branch/Commit ID: f1d8909df368a704f094bf73fd734f34e3d7d36a |
||
umi molecular alignment fastq workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/alignment_umi_molecular.cwl Branch/Commit ID: 742dbafb5fb103d8578f48a0576c14dd8dae3b2a |