Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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kmer_ref_compare_wnode
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_ref_compare_wnode.cwl Branch/Commit ID: 041a234a935c7af7d3db95353ef80c61c88fc010 |
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Bisulfite alignment and QC
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/bisulfite.cwl Branch/Commit ID: 74647cc0f1abac4ee22950cfa89c44cf2ca3cffd |
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umi molecular alignment workflow
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https://github.com/tmooney/cancer-genomics-workflow.git
Path: definitions/subworkflows/molecular_alignment.cwl Branch/Commit ID: 233f026ffce240071edda526391be0c03186fce8 |
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etl_http.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/etl_http.cwl Branch/Commit ID: 1326fb7fedca91a274fb7596c9052a4d279eacf9 |
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Subworkflow to allow calling different SV callers which require bam files as inputs
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/single_sample_sv_callers.cwl Branch/Commit ID: 54846feabbf008c1946db2a86d87252e0edd95b0 |
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main-NA12878-platinum-chr20.cwl
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https://github.com/BD2KGenomics/toil-workflows.git
Path: NA12878-platinum-chr20-workflow/main-NA12878-platinum-chr20.cwl Branch/Commit ID: 42125c2912a176e61cb7ca53d9b1785f7a3826fa |
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align_sort_sa
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https://github.com/ncbi-gpipe/pgap.git
Path: task_types/tt_align_sort_sa.cwl Branch/Commit ID: 8dcf1cc79ea26e9fec999e77ceae1aebfff2cff6 |
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phase VCF
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https://github.com/tmooney/cancer-genomics-workflow.git
Path: definitions/subworkflows/phase_vcf.cwl Branch/Commit ID: 233f026ffce240071edda526391be0c03186fce8 |
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step-valuefrom3-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/step-valuefrom3-wf.cwl Branch/Commit ID: 89ccbfc53ff3bb6abe2eb90bb7e0091c54c18f5c |
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count-lines11-extra-step-wf-noET.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/count-lines11-extra-step-wf-noET.cwl Branch/Commit ID: 368b562a1449e8cd39ae8b7f05926b2bfb9b22df |