Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	blastp_wnode_naming	https://github.com/ncbi/pgap.git Path: task_types/tt_blastp_wnode_naming.cwl Branch/Commit ID: 45d134ce3d436c53637a2d83755e9b4613267e9f
	Tumor-Only Detect Variants workflow	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/tumor_only_detect_variants.cwl Branch/Commit ID: 389f6edccab082d947bee9c032f59dbdf9f7c325
	count-lines9-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/count-lines9-wf.cwl Branch/Commit ID: 4df56e95e6fceab69e677b539f3532cbf5946197
	heatmap-prepare.cwl Workflow runs homer-make-tag-directory.cwl tool using scatter for the following inputs - bam_file - fragment_size - total_reads `dotproduct` is used as a `scatterMethod`, so one element will be taken from each array to construct each job: 1) bam_file[0] fragment_size[0] total_reads[0] 2) bam_file[1] fragment_size[1] total_reads[1] ... N) bam_file[N] fragment_size[N] total_reads[N] `bam_file`, `fragment_size` and `total_reads` arrays should have the identical order.	https://github.com/Barski-lab/workflows.git Path: tools/heatmap-prepare.cwl Branch/Commit ID: e706ffe742cfdf713c4315ab2fb56d07f7e688cb
	kmer_cache_store	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_cache_store.cwl Branch/Commit ID: bc0f1f147231c759fb2d5ff99f41b2667a5588ad
	helloworld-nested.cwl	https://github.com/audrium/reana-demo-scattered-helloworld.git Path: workflow/cwl/helloworld-nested.cwl Branch/Commit ID: 7c5c9e3517cf6195c44dfab126184e6486d69239
	helloworld.cwl	https://github.com/audrium/reana-demo-scattered-helloworld.git Path: workflow/cwl/helloworld.cwl Branch/Commit ID: 7c5c9e3517cf6195c44dfab126184e6486d69239
	exome alignment with qc, no bqsr, no verify_bam_id	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/alignment_exome_nonhuman.cwl Branch/Commit ID: 04d21c33a5f2950e86db285fa0a32a6659198d8a
	scatter-valuefrom-wf3.cwl#main	https://github.com/common-workflow-language/common-workflow-language.git Path: v1.0/v1.0/scatter-valuefrom-wf3.cwl Branch/Commit ID: 4fe434e969c93c94b690ba72db295d9d52a6f576 Packed ID: main
	PGAP Pipeline PGAP pipeline for external usage, powered via containers	https://github.com/ncbi/pgap.git Path: wf_common.cwl Branch/Commit ID: 7cee09fb3e33c851e4e1dfc965c558b82290a785