Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph 01-qc-se.cwl

ChIP-seq 01 QC - reads: SE

https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/ChIP-seq_pipeline/01-qc-se.cwl

Branch/Commit ID: 6e68bda2cb45e8dc8e4d067c4220d65acfa53065

workflow graph 03-map-se.cwl

ChIP-seq 03 mapping - reads: SE

https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/ChIP-seq_pipeline/03-map-se.cwl

Branch/Commit ID: 6e68bda2cb45e8dc8e4d067c4220d65acfa53065

workflow graph 02-trim-se.cwl

ChIP-seq 02 trimming - reads: SE

https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/ChIP-seq_pipeline/02-trim-se.cwl

Branch/Commit ID: 6e68bda2cb45e8dc8e4d067c4220d65acfa53065

workflow graph tRNA_selection.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/tRNA_selection.cwl

Branch/Commit ID: f6b5196bd493b0872ee6e63aa3499738bb7d53d6

workflow graph pz_workflow.cwl

https://github.com/EiffL/descpipe-cwl.git

Path: workflows/pz_workflow.cwl

Branch/Commit ID: b6f1218259638c234f0007020b312c460ef57071

workflow graph preprocess.cwl

https://github.com/Epigenomics-Screw/Screw.git

Path: cwl/preprocess.cwl

Branch/Commit ID: f81a4e3e0ad7dd859d31fec5776e3852b7ad0e68

workflow graph Hello World

Outputs a message using echo

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/hello-workflow.cwl

Branch/Commit ID: 48bd6c751aceef30614d9e43d91865980035781f

workflow graph word-mapping-dir.cwl#word-mapping-wf.cwl

https://github.com/KBNLresearch/ochre.git

Path: ochre/cwl/word-mapping-dir.cwl

Branch/Commit ID: bfd504ae910fbf7a3492f53430a1c9f3c3c97470

Packed ID: word-mapping-wf.cwl

workflow graph LSU-from-tablehits.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/LSU-from-tablehits.cwl

Branch/Commit ID: 71d9c83761ea301a895dd669902979ef5a4b279b

workflow graph preprocess_vcf.cwl

This workflow will perform preprocessing steps on VCFs for the OxoG/Variantbam/Annotation workflow.

https://github.com/ICGC-TCGA-PanCancer/pcawg-minibam.git

Path: preprocess_vcf.cwl

Branch/Commit ID: e9f3694e31e3c1570183a4f444a44015766f9f2f