Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Unaligned to aligned BAM
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https://github.com/genome/arvados_trial.git
Path: unaligned_bam_to_bqsr/align.cwl Branch/Commit ID: 3e84098f77686523fe3dbb807b35450b56501c59 |
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Transcripts annotation workflow
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https://github.com/mscheremetjew/workflow-is-cwl.git
Path: workflows/TranscriptsAnnotation-wf.cwl Branch/Commit ID: e9d078a5874dd5d545116113f5a830915ddd3e1d |
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main-somatic.cwl
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https://github.com/FarahZKhan/bcbio_test_cwl.git
Path: somatic/somatic-workflow/main-somatic.cwl Branch/Commit ID: 0eecb30ff25047ce354061993e96aaa84fd017d5 |
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demo_megahit_pipeline_paired.cwl
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https://github.com/EBI-Metagenomics/CWL-assembly.git
Path: cwl/demo_megahit_pipeline_paired.cwl Branch/Commit ID: cb4831bd42c668c39d2b01c626d9ec5636a579bb |
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Tumor-Only Detect Variants workflow
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https://github.com/genome/cancer-genomics-workflow.git
Path: detect_variants/tumor_only_detect_variants.cwl Branch/Commit ID: 6eb7d35ad46207f4ff49e84106b717e17331eb4b |
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etl_http.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/etl_http.cwl Branch/Commit ID: b0ff19e4e2944340dca1aceaa20ba10624fa59d0 |
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metacal-wf.cwl
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https://github.com/EiffL/metacal-pipeline.git
Path: tools/metacal-wf.cwl Branch/Commit ID: f957c91eb041d0fd010cd983e0567a997698979e |
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SSU-from-tablehits.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/SSU-from-tablehits.cwl Branch/Commit ID: f993cada89d2c6f7480a0d56baa7836a361b1f3a |
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EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.
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https://github.com/FarahZKhan/ebi-metagenomics-cwl.git
Path: workflows/emg-qc-single.cwl Branch/Commit ID: bcfe5f9affd23d52467f69b4b21d1098f0ca95d7 |
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metacal-wf.cwl
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https://github.com/EiffL/metacal-pipeline.git
Path: tools/metacal-wf.cwl Branch/Commit ID: b5f3eaf27bfe135dbe009a05f36bf031fd227c81 |
