Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph transform.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/dnaseq/validate/transform.cwl

Branch/Commit ID: a3eec6c1081d28efe00a0d269fb41303acc4ccdd
workflow graph running cellranger mkfastq and count

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/cellranger_mkfastq_and_count.cwl

Branch/Commit ID: 72c4c3115956340f35e72cda1fd46ec276f1ca03
workflow graph star_samtools_stringtie_prepDE_DESeq2.cwl

https://github.com/rawgene/cwl.git

Path: workflows/star_samtools_stringtie_prepDE_DESeq2.cwl

Branch/Commit ID: 33a3cdba1184ad14e7a168eef3c505b9b4332f47
workflow graph wgs alignment and germline variant detection

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/germline_wgs.cwl

Branch/Commit ID: 27aa22e6f5d2fca75abca42d52867259fd0725b9
workflow graph hmmsearch_wnode and gpx_qdump combined workflow to apply scatter/gather

https://github.com/ncbi/pgap.git

Path: task_types/tt_hmmsearch_wnode_plus_qdump.cwl

Branch/Commit ID: e4d6182d5f7a6a880e5f2b21273cf40d25e187df
workflow graph hg38-tileassembly.cwl

https://github.com/curoverse/l7g.git

Path: cwl-version/experimental/l7g-tile-assembly/tile-assembly-hg38/cwl/hg38-tileassembly.cwl

Branch/Commit ID: e4076d3ef7deda1bcc57bfe5e3d1dc7bf58238ff
workflow graph Varscan Workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/varscan_pre_and_post_processing.cwl

Branch/Commit ID: e649fcb1092905c539be026a3f23c82d5b0871d2
workflow graph wf-alignment.cwl

https://github.com/bcbio/bcbio_validation_workflows.git

Path: somatic-lowfreq/pisces-titr-workflow/wf-alignment.cwl

Branch/Commit ID: a297e87e014de998b8df9c90700c29173ec09932
workflow graph rsem_from_sra_wf.cwl

https://github.com/inutano/sra-star-rsem.git

Path: analysis/processing/readcount/cwl/rsem_from_sra_wf.cwl

Branch/Commit ID: aecfd97e0795655a14efc60ce2d705290cdfccf0
workflow graph cmsearch-multimodel.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/cmsearch-multimodel.cwl

Branch/Commit ID: a8abd0e66de7b5ffe24cfe7f39d7027103c6d3b4