Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph mutect parallel workflow

https://github.com/genome/cancer-genomics-workflow.git

Path: mutect/workflow.cwl

Branch/Commit ID: 4cded2c595b2ff83046729cd230f5ad34be3137d
workflow graph extract_readgroup_fastq_pe_http.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/extract_readgroup_fastq_pe_http.cwl

Branch/Commit ID: 3cd06184444bb85e9773a3e7dc548c6dd3bdaccb
workflow graph bwa_se.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/bwa_se.cwl

Branch/Commit ID: 3cd06184444bb85e9773a3e7dc548c6dd3bdaccb
workflow graph Execute CRISPR

https://github.com/ncbi-gpipe/pgap.git

Path: bacterial_mobile_elem/wf_bacterial_mobile_elem.cwl

Branch/Commit ID: 33414c888997d558bdcb558ca33c3a728a3e6143
workflow graph Find reads with predicted coding sequences above 60 AA in length

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/orf_prediction.cwl

Branch/Commit ID: 43d2fb8a5430dc56b55e84e3986d0079cad8d185
workflow graph panel of normals workflow

https://github.com/hamid58b/cancer-genomics-workflow.git

Path: panel_of_normals/workflow.cwl

Branch/Commit ID: 8c5ae3dbabfe73e0a577b91b25ef5b0b32f388cb
workflow graph Run tRNAScan

https://github.com/ncbi-gpipe/pgap.git

Path: bacterial_trna/wf_trnascan.cwl

Branch/Commit ID: 33414c888997d558bdcb558ca33c3a728a3e6143
workflow graph collate_unique_SSU_headers.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/collate_unique_SSU_headers.cwl

Branch/Commit ID: 316831663e84623eb0e3a260af252fef441924d4
workflow graph index sim seq

create sorted / filtered similarity file with feature sequences, and index by md5

 https://github.com/MG-RAST/pipeline.git

Path: CWL/Workflows/index_sim_seq.workflow.cwl

Branch/Commit ID: 932da3abed7166bd5a962871386ba2c31d47b85c
workflow graph gp_makeblastdb

https://github.com/ncbi-gpipe/pgap.git

Path: progs/gp_makeblastdb.cwl

Branch/Commit ID: 33414c888997d558bdcb558ca33c3a728a3e6143