Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.
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https://github.com/proteinswebteam/ebi-metagenomics-cwl.git
Path: workflows/emg-qc-paired.cwl Branch/Commit ID: cac44f2cf14110fde9951161c663c4525772f616 |
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bwa_pe.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/bwa_pe.cwl Branch/Commit ID: cf2e9d7c3cc87ce97a1fbf73fad574b170fedcfb |
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PGAP Pipeline
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https://github.com/ncbi-gpipe/pgap.git
Path: progs/unit_tests/test_sqn2gbent/test.cwl Branch/Commit ID: be4060eec958c419c0f559da575533c8e0459ae5 |
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capmq.cwl
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https://github.com/wtsi-hgi/arvados-pipelines.git
Path: cwl/workflows/capmq.cwl Branch/Commit ID: c822e40575ecd7fc65626a73363f3bbc193b9a74 |
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Detect Variants workflow
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https://github.com/genome/cancer-genomics-workflow.git
Path: detect_variants/detect_variants.cwl Branch/Commit ID: 4cded2c595b2ff83046729cd230f5ad34be3137d |
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blastp_wnode_naming
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https://github.com/ncbi/pgap.git
Path: task_types/tt_blastp_wnode_naming.cwl Branch/Commit ID: 6d8d29a2156b93a75f1d1c6952738bd63f6bd98e |
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readgroups_bam_to_readgroups_fastq_lists.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/readgroups_bam_to_readgroups_fastq_lists.cwl Branch/Commit ID: f34d3963b33e0a379338cb3cb75b0016f012bf2c |
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Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass1.cwl Branch/Commit ID: 550682d2fe3348161eab1b8612e48a59af4ac6a5 |
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bact_get_kmer_reference
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https://github.com/ncbi-gpipe/pgap.git
Path: task_types/tt_bact_get_kmer_reference.cwl Branch/Commit ID: 8dcf1cc79ea26e9fec999e77ceae1aebfff2cff6 |
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protein_extract
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https://github.com/ncbi/pgap.git
Path: progs/protein_extract.cwl Branch/Commit ID: 041a234a935c7af7d3db95353ef80c61c88fc010 |
