Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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tRNA_selection.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/tRNA_selection.cwl Branch/Commit ID: fa86fce570ab91c624272c8ffda672069d2f276d |
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spiel.cwl
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https://github.com/gijzelaerr/spiel.git
Path: spiel.cwl Branch/Commit ID: bc4db1c2314eb1655696bf2b6c587d3f1efed65e |
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readgroup_fastq_se.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/readgroup_fastq_se.cwl Branch/Commit ID: b0ff19e4e2944340dca1aceaa20ba10624fa59d0 |
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tt_hmmsearch_wnode.cwl
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https://github.com/ncbi-gpipe/pgap.git
Path: task_types/tt_hmmsearch_wnode.cwl Branch/Commit ID: c18fbba1308aed7406b94e9ddac02584407d9319 |
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EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/emg-qc-paired.cwl Branch/Commit ID: 85155424fa5654526517369be2fa479a7d4d90de |
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cram_to_bam workflow
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https://github.com/genome/cancer-genomics-workflow.git
Path: cram_to_bam/workflow.cwl Branch/Commit ID: 6791f7701b91dd64f9255d6e1ebde5995ebc581e |
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readgroup_fastq_pe.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/readgroup_fastq_pe.cwl Branch/Commit ID: b0ff19e4e2944340dca1aceaa20ba10624fa59d0 |
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tt_hmmsearch_wnode.cwl
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https://github.com/ncbi-gpipe/pgap.git
Path: task_types/tt_hmmsearch_wnode.cwl Branch/Commit ID: df5e285d48cbdf2e296d530a3067d41b1905e13a |
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oxog_varbam_annotate_wf.cwl
This workflow will run OxoG, variantbam, and annotate. Run this as `dockstore --script --debug workflow launch --descriptor cwl --local-entry --entry ./oxog_varbam_annotate_wf.cwl --json oxog_varbam_annotat_wf.input.json ` |
https://github.com/baminou/OxoG-Dockstore-Tools.git
Path: oxog_varbam_annotate_wf.cwl Branch/Commit ID: a7d65918c444ee3c99c56bd0f08c2ce670a853ed |
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etl_http.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/dnaseq/etl_http.cwl Branch/Commit ID: b0ff19e4e2944340dca1aceaa20ba10624fa59d0 |
