Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Run genomic CMsearch (5S rRNA)	https://github.com/ncbi-gpipe/pgap.git Path: bacterial_noncoding/wf_gcmsearch.cwl Branch/Commit ID: 33414c888997d558bdcb558ca33c3a728a3e6143
	per_cluster_workflow.cwl	https://github.com/fstrozzi/scalability-reproducibility-chapter.git Path: CWL/per_cluster_workflow.cwl Branch/Commit ID: 52838e4f6b8f5a16cb405709fe0030e0d00854ac
	EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.	https://github.com/farahzkhan/ebi-metagenomics-cwl.git Path: workflows/emg-qc-paired.cwl Branch/Commit ID: bcfe5f9affd23d52467f69b4b21d1098f0ca95d7
	Run genomic CMsearch (Rfam rRNA)	https://github.com/ncbi-gpipe/pgap.git Path: bacterial_ncrna/wf_gcmsearch.cwl Branch/Commit ID: 33414c888997d558bdcb558ca33c3a728a3e6143
	main-pisces-titr.cwl	https://github.com/bcbio/bcbio_validation_workflows.git Path: somatic-lowfreq/pisces-titr-workflow/main-pisces-titr.cwl Branch/Commit ID: c4592973b1580e3ff44cb697f64b12345b91e6f5
	Non-Coding Bacterial Genes	https://github.com/ncbi-gpipe/pgap.git Path: bacterial_noncoding/wf_bacterial_noncoding.cwl Branch/Commit ID: 33414c888997d558bdcb558ca33c3a728a3e6143
	Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)	https://github.com/ncbi-gpipe/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass1.cwl Branch/Commit ID: 33414c888997d558bdcb558ca33c3a728a3e6143
	tt_hmmsearch_wnode.cwl	https://github.com/ncbi-gpipe/pgap.git Path: task_types/tt_hmmsearch_wnode.cwl Branch/Commit ID: 33414c888997d558bdcb558ca33c3a728a3e6143
	pindel parallel workflow	https://github.com/genome/arvados_trial.git Path: pindel/workflow.cwl Branch/Commit ID: 4cded2c595b2ff83046729cd230f5ad34be3137d
	WGS QC workflow	https://github.com/genome/cancer-genomics-workflow.git Path: qc/workflow_wgs.cwl Branch/Commit ID: 4cded2c595b2ff83046729cd230f5ad34be3137d