Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	trnascan_wnode and gpx_qdump combined	https://github.com/ncbi/pgap.git Path: bacterial_trna/wf_scan_and_dump.cwl Branch/Commit ID: e9cc6de8cd1e00345969c646e5e6f27d7d10420f
	Apply filters to VCF file	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/germline_filter_vcf.cwl Branch/Commit ID: 844c10a4466ab39c02e5bfa7a210c195b8efa77a
	scatter GATK HaplotypeCaller over intervals	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/gatk_haplotypecaller_iterator.cwl Branch/Commit ID: 844c10a4466ab39c02e5bfa7a210c195b8efa77a
	workflow.cwl	https://github.com/nal-i5k/organism_onboarding.git Path: flow_dispatch/2blat/workflow.cwl Branch/Commit ID: 096a9feffe292a1aeb329552661d27bb579e084c
	Exome QC workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/qc_exome_no_verify_bam.cwl Branch/Commit ID: cc3e7f1ccfdc7101c22bf88792608504eea7d53a
	umi per-lane alignment subworkflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/umi_alignment.cwl Branch/Commit ID: b7d9ace34664d3cedb16f2512c8a6dc6debfc8ca
	umi per-lane alignment subworkflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/umi_alignment.cwl Branch/Commit ID: 7b4b489474473c3d2d992a838b89632c2b97dc2c
	Unaligned bam to sorted, markduped bam	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/align_sort_markdup.cwl Branch/Commit ID: cc3e7f1ccfdc7101c22bf88792608504eea7d53a
	exome alignment with qc	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/alignment_exome.cwl Branch/Commit ID: 844c10a4466ab39c02e5bfa7a210c195b8efa77a
	exome alignment with qc, no bqsr, no verify_bam_id	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/alignment_exome_mouse.cwl Branch/Commit ID: 42c66dd24ce5026d3f717214ddb18b7b4fae93cf