Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph RNA-Seq alignment and transcript/gene abundance workflow

https://github.com/genome/cancer-genomics-workflow.git

Path: rnaseq/workflow.cwl

Branch/Commit ID: d1ee6a2a323cee7e4af00c7e0b926c2192038e1d
workflow graph megahit_pipeline.cwl

https://github.com/EBI-Metagenomics/CWL-assembly.git

Path: tools/megahit_pipeline.cwl

Branch/Commit ID: 6d5695af158f4513ce383bb2b15319449f7ddb07
workflow graph echo-wc.cwl

Counts words of a message via echo and wc

 https://github.com/NLeSC/scriptcwl.git

Path: tests/data/workflows/echo-wc.cwl

Branch/Commit ID: 2e004c6a8c911691836434b387892e51c9a0c4a9
workflow graph preference-workflow.cwl

https://github.com/duke-gcb/imads-worker.git

Path: predict_service/preference-workflow.cwl

Branch/Commit ID: 8e56a3e51145e2651d454b51b95c4585de7e7ec5
workflow graph default-dir5.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/default-dir5.cwl

Branch/Commit ID: e4a52682f3bdefafe5c27e32983fed31116ac489
workflow graph mixed_library_metrics.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/mirnaseq/mixed_library_metrics.cwl

Branch/Commit ID: 3cb464a3a5c39cc060cd23d9c60918bc9ffb169b
workflow graph exome_metrics.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/exome_metrics.cwl

Branch/Commit ID: 3cd06184444bb85e9773a3e7dc548c6dd3bdaccb
workflow graph etl.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/mirnaseq/etl.cwl

Branch/Commit ID: 3cb464a3a5c39cc060cd23d9c60918bc9ffb169b
workflow graph 03-map-pe-blacklist-removal.cwl

ATAC-seq 03 mapping - reads: PE - blacklist removal

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/ATAC-seq_pipeline/03-map-pe-blacklist-removal.cwl

Branch/Commit ID: 71146d85ae7f0c562ec0d454fbbb7085a827356e
workflow graph Find reads with predicted coding sequences above 60 AA in length

https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git

Path: workflows/orf_prediction.cwl

Branch/Commit ID: 886df9de6713e06228d2560c40f451155a196383