Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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wf.cwl#QualityFilterOuter.cwl
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https://github.com/aheinzel/tmp_rhapsody_for_cwl_vis.git
Path: wf.cwl Branch/Commit ID: main Packed ID: QualityFilterOuter.cwl |
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Apply filters to VCF file
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https://github.com/apaul7/cancer-genomics-workflow.git
Path: definitions/subworkflows/filter_vcf_nonhuman.cwl Branch/Commit ID: low-vaf |
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presto.cwl
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https://github.com/EOSC-LOFAR/presto-cwl.git
Path: presto.cwl Branch/Commit ID: visualise |
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bam to trimmed fastqs and biscuit alignments
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https://github.com/apaul7/cancer-genomics-workflow.git
Path: definitions/subworkflows/bam_to_trimmed_fastq_and_biscuit_alignments.cwl Branch/Commit ID: low-vaf |
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QIIME2 Step 1 paired end sequences
QIIME2 Import and Demux Step 1 paired end sequences |
https://github.com/duke-gcb/bespin-cwl.git
Path: packed/qiime2-step1-import-demux-paired.cwl Branch/Commit ID: qiime2-workflow-paired Packed ID: main |
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sum-wf-noET.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/sum-wf-noET.cwl Branch/Commit ID: main |
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01-map-se.cwl
DNase-seq 01 mapping - reads: SE |
https://github.com/alexbarrera/GGR-cwl.git
Path: v1.0/DNase-seq_pipeline/01-map-se.cwl Branch/Commit ID: master |
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EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/emg-qc-paired.cwl Branch/Commit ID: f914942 |
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count-lines11-wf.cwl
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/count-lines11-wf.cwl Branch/Commit ID: master |
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SoupX (workflow) - an R package for the estimation and removal of cell free mRNA contamination
Wrapped in a workflow SoupX tool for easy access to Cell Ranger pipeline compressed outputs. |
https://github.com/Barski-lab/workflows.git
Path: tools/soupx-subworkflow.cwl Branch/Commit ID: master |
