Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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spurious_annot
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https://github.com/ncbi-gpipe/pgap.git
Path: spurious_annot/wf_spurious_annot_pass1.cwl Branch/Commit ID: bf7e02ee89d1bb18462cefdbe0db41b09fe75236 |
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gp_makeblastdb
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https://github.com/ncbi-gpipe/pgap.git
Path: progs/gp_makeblastdb.cwl Branch/Commit ID: bf7e02ee89d1bb18462cefdbe0db41b09fe75236 |
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Execute CRISPR
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https://github.com/ncbi-gpipe/pgap.git
Path: bacterial_mobile_elem/wf_bacterial_mobile_elem.cwl Branch/Commit ID: bf7e02ee89d1bb18462cefdbe0db41b09fe75236 |
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Run genomic CMsearch (Rfam rRNA)
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https://github.com/ncbi-gpipe/pgap.git
Path: bacterial_ncrna/wf_gcmsearch.cwl Branch/Commit ID: bf7e02ee89d1bb18462cefdbe0db41b09fe75236 |
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Non-Coding Bacterial Genes
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https://github.com/ncbi-gpipe/pgap.git
Path: bacterial_noncoding/wf_bacterial_noncoding.cwl Branch/Commit ID: bf7e02ee89d1bb18462cefdbe0db41b09fe75236 |
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add_multiply_example.cwl
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https://github.com/NLeSC/scriptcwl.git
Path: scriptcwl/examples/add_multiply_example.cwl Branch/Commit ID: 56274fd44550c65385a1ab127402b7339fc18043 |
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preprocess_vcf.cwl
This workflow will perform preprocessing steps on VCFs for the OxoG/Variantbam/Annotation workflow. |
https://github.com/ICGC-TCGA-PanCancer/OxoG-Dockstore-Tools.git
Path: preprocess_vcf.cwl Branch/Commit ID: 6366ed398da10019b6d81a789291af6d909f28f4 |
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wf-alignment.cwl
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https://github.com/bcbio/bcbio_validation_workflows.git
Path: somatic-giab-mix/somatic-giab-mix-workflow/wf-alignment.cwl Branch/Commit ID: c4592973b1580e3ff44cb697f64b12345b91e6f5 |
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SSU-from-tablehits.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/SSU-from-tablehits.cwl Branch/Commit ID: 5dc7c5ca618a248a99bd4bf5f3042cdb21947193 |
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split-bams-by-strand-and-index.cwl
Split reads in a BAM file by strands and index forward and reverse output BAM files |
https://github.com/alexbarrera/GGR-cwl.git
Path: v1.0/quant/split-bams-by-strand-and-index.cwl Branch/Commit ID: 6e68bda2cb45e8dc8e4d067c4220d65acfa53065 |
