Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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wgs alignment with qc
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![]() Path: definitions/pipelines/alignment_wgs.cwl Branch/Commit ID: 742dbafb5fb103d8578f48a0576c14dd8dae3b2a |
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CLE gold vcf evaluation workflow
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![]() Path: definitions/subworkflows/vcf_eval_cle_gold.cwl Branch/Commit ID: 54846feabbf008c1946db2a86d87252e0edd95b0 |
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env-wf1.cwl
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![]() Path: cwltool/schemas/v1.0/v1.0/env-wf1.cwl Branch/Commit ID: 9a8e654a91ea5d26e8452dd1cecf3faf22b7a12e |
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kmer_top_n
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![]() Path: task_types/tt_kmer_top_n.cwl Branch/Commit ID: 041a234a935c7af7d3db95353ef80c61c88fc010 |
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pipeline.cwl
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![]() Path: pipeline.cwl Branch/Commit ID: 5224e3ab90a5de2666764e1061acb2df2c590ec5 |
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Immunotherapy Workflow
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![]() Path: definitions/pipelines/immuno.cwl Branch/Commit ID: 9e5f228bc1a3d0dfe950b5d41d7e4319e834a6d4 |
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Subworkflow that runs cnvkit in single sample mode and returns a vcf file
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![]() Path: definitions/subworkflows/cnvkit_single_sample.cwl Branch/Commit ID: 233f026ffce240071edda526391be0c03186fce8 |
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Chipseq alignment with qc and creating homer tag directory
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![]() Path: definitions/pipelines/chipseq.cwl Branch/Commit ID: 74647cc0f1abac4ee22950cfa89c44cf2ca3cffd |
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01-map-se.cwl
DNase-seq 01 mapping - reads: SE |
![]() Path: v1.0/DNase-seq_pipeline/01-map-se.cwl Branch/Commit ID: 4e568335133405d28f4b73ae11e7f51f2900dfa3 |
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extract_readgroup_fastq_pe.cwl
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![]() Path: workflows/bamfastq_align/extract_readgroup_fastq_pe.cwl Branch/Commit ID: 1326fb7fedca91a274fb7596c9052a4d279eacf9 |