Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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exome alignment with qc
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https://github.com/genome/cancer-genomics-workflow.git
Path: exome_alignment.cwl Branch/Commit ID: ab3cc1f460146c60d7de417508f0c1ea70506e6a |
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stats.cwl
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https://github.com/EBI-Metagenomics/CWL-assembly.git
Path: cwl/stats/stats.cwl Branch/Commit ID: 0ce32c67ded8d249329c8d5a6fda2471aee9b5c3 |
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Per-chromosome pindel
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https://github.com/genome/cancer-genomics-workflow.git
Path: pindel/pindel_cat.cwl Branch/Commit ID: e027d487e5cefba4f446f2036b933955608dbc31 |
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count-lines5-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/count-lines5-wf.cwl Branch/Commit ID: e4a52682f3bdefafe5c27e32983fed31116ac489 |
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extract_readgroup_fastq_pe.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/extract_readgroup_fastq_pe.cwl Branch/Commit ID: cf2e9d7c3cc87ce97a1fbf73fad574b170fedcfb |
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strelka workflow
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https://github.com/genome/cancer-genomics-workflow.git
Path: strelka/workflow.cwl Branch/Commit ID: e027d487e5cefba4f446f2036b933955608dbc31 |
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check_md5_wf.cwl
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https://github.com/heliumdatacommons/TOPMed_RNAseq_CWL.git
Path: workflow/checker-workflows/check_md5_wf.cwl Branch/Commit ID: 06c6ff20f4e719d7f7224c17b22dce8617e92447 |
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bwa_pe.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/bwa_pe.cwl Branch/Commit ID: 3cd06184444bb85e9773a3e7dc548c6dd3bdaccb |
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kmer_seq_entry_extract_wnode
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https://github.com/ncbi-gpipe/pgap.git
Path: task_types/tt_kmer_seq_entry_extract_wnode.cwl Branch/Commit ID: 71e3a42eadc007b66ef4689086530dfc3123d32f |
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hmmsearch_wnode and gpx_qdump combined workflow to apply scatter/gather
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https://github.com/ncbi/pgap.git
Path: task_types/tt_hmmsearch_wnode_plus_qdump.cwl Branch/Commit ID: 550682d2fe3348161eab1b8612e48a59af4ac6a5 |
