Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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oxog_sub_wf.cwl
This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow! |
https://github.com/ICGC-TCGA-PanCancer/OxoG-Dockstore-Tools.git
Path: oxog_sub_wf.cwl Branch/Commit ID: master |
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record-output-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/record-output-wf.cwl Branch/Commit ID: master |
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varscan somatic workflow
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https://github.com/genome/cancer-genomics-workflow.git
Path: varscan/varscan.cwl Branch/Commit ID: toil_compatibility |
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tRNA_selection.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/tRNA_selection.cwl Branch/Commit ID: 0cd2d70 |
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rRNA_selection.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/rRNA_selection.cwl Branch/Commit ID: 0cd2d70 |
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Unaligned BAM to BQSR and VCF
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https://github.com/genome/cancer-genomics-workflow.git
Path: unaligned_bam_to_bqsr/workflow.cwl Branch/Commit ID: toil_compatibility |
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Non-Coding Bacterial Genes
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https://github.com/ncbi/pgap.git
Path: bacterial_noncoding/wf_bacterial_noncoding.cwl Branch/Commit ID: master |
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Compute average of average per cross-mapped famil(y)ies
Compute average structure for all averaged structures corresponding to UniProt domain instances cross-mapped from Pfam/CATH to a CATH/Pfam family. First computes average per UniProt domain instance and then average all averaged structures per Pfam family. |
https://gitlab.inria.fr/capsid.public_codes/CroMaSt.git
Path: Tools/other_avg_subwf.cwl Branch/Commit ID: main |
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rRNA_selection.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/rRNA_selection.cwl Branch/Commit ID: 1b0851e |
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metrics-flow.cwl
Run metrics workflow |
https://github.com/sentieon/sentieon-cwl.git
Path: stage/metrics-flow.cwl Branch/Commit ID: master |
