Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Low vaf Detect Variants workflow for Megan Cooper	https://github.com/apaul7/cancer-genomics-workflow.git Path: definitions/pipelines/low_vaf_detect_variants.cwl Branch/Commit ID: low-vaf
	germline-gpu.cwl	https://github.com/mr-c/WGSpipeline.git Path: Workflows/germline-gpu.cwl Branch/Commit ID: cuda_fixes
	if_input_is_bz2_generate_md5sum_else_return_input_chksum_json.cwl	https://github.com/cancerit/workflow-seq-import.git Path: cwls/toolkit/if_input_is_bz2_generate_md5sum_else_return_input_chksum_json.cwl Branch/Commit ID: 0.4.0
	anonymize.cwl Replace named entities in a directory of text files. Can be used as part of an data anonymization workflow.	https://github.com/WhatWorksWhenForWhom/nlppln.git Path: nlppln/cwl/anonymize.cwl Branch/Commit ID: master
	broad-best-practice-data-pre-processing-workflow-4-1-0-0_decomposed.cwl	https://github.com/svonworl/Broad-Best-Practice-Data-pre-processing-CWL1.0-workflow.git Path: broad-best-practice-data-pre-processing-workflow-4-1-0-0_decomposed.cwl Branch/Commit ID: master
	SSU-from-tablehits.cwl	https://github.com/proteinswebteam/ebi-metagenomics-cwl.git Path: tools/SSU-from-tablehits.cwl Branch/Commit ID: master
	EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.	https://github.com/FarahZKhan/ebi-metagenomics-cwl.git Path: workflows/emg-qc-single.cwl Branch/Commit ID: master
	pipeline-fastq2vcf.cwl DNAseq pipeline from fastq to vcf	https://github.com/Sentieon/Sentieon-cwl.git Path: pipeline/pipeline-fastq2vcf.cwl Branch/Commit ID: master
	module-2.cwl	https://github.com/mskcc/Innovation-Pipeline.git Path: workflows/module-2.cwl Branch/Commit ID: master
	rRNA_selection.cwl	https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git Path: tools/rRNA_selection.cwl Branch/Commit ID: 43d2fb8

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