Explore Workflows
View already parsed workflows here or click here to add your own
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Optical throughput measurements via muon ring analysis
Upon receiving a new DL0 data product (from either Monte Carlo simulations or observations), DPPS triggers the CalibPipe (ctapipe-process) to process the data using ctapipe, extracting the signal charges and reconstructing muon parameters. The second step involves using the CalibPipe tool to estimate the telescope’s optical throughput using a predefined number of muon events. |
Path: uc-optical-throughput-calibration-with-muons.cwl Branch/Commit ID: master |
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access_qc.cwl
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Path: access_qc.cwl Branch/Commit ID: develop |
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salmon_wf_se.cwl
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Path: workflows/salmon/single_end/salmon_wf_se.cwl Branch/Commit ID: master |
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wf-alignment.cwl
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Path: giab-joint/giab-joint-workflow/wf-alignment.cwl Branch/Commit ID: master |
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fillout_index_prefilter.cwl
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Path: cwl/fillout_index_prefilter.cwl Branch/Commit ID: master |
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snapanalysis_setup_and_analyze.cwl
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Path: steps/snapanalysis_setup_and_analyze.cwl Branch/Commit ID: 5465f66 |
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scatter-wf2.cwl
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Path: tests/scatter-wf2.cwl Branch/Commit ID: master |
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Bisulfite alignment and QC
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Path: definitions/pipelines/bisulfite.cwl Branch/Commit ID: 5f120e5bc3c0f75bfbc636ea2c6f4393f5d45ca1 |
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01-qc-se.cwl
ChIP-seq 01 QC - reads: SE |
Path: v1.0/ChIP-seq_pipeline/01-qc-se.cwl Branch/Commit ID: master |
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bulk scRNA-seq pipeline using Salmon
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Path: bulk-pipeline.cwl Branch/Commit ID: b9c8e26 |
