Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/emg-qc-paired.cwl Branch/Commit ID: 35a98a23d8e108dbd91814c1688d22063f23a8ea |
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bam-bedgraph-bigwig.cwl
Workflow converts input BAM file into bigWig and bedGraph files |
https://github.com/Barski-lab/ga4gh_challenge.git
Path: workflows/bam-bedgraph-bigwig.cwl Branch/Commit ID: 77330fac31568e2c3e080ea771df813c039aefe6 |
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Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)
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https://github.com/ncbi-gpipe/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass1.cwl Branch/Commit ID: df5e285d48cbdf2e296d530a3067d41b1905e13a |
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RMSynth Workflow
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https://github.com/as595/CWL_RMSynth.git
Path: rmsynth_workflow1.cwl Branch/Commit ID: b9dbea069327f9b76dc174c23bae1e07464461b6 |
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wf-alignment.cwl
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https://github.com/bcbio/bcbio_validation_workflows.git
Path: somatic-lowfreq/pisces-titr-workflow/wf-alignment.cwl Branch/Commit ID: 9606af30d5f047745a1cd7ec1a59d65508ed256e |
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PGAP Pipeline
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https://github.com/ncbi-gpipe/pgap.git
Path: progs/unit_tests/test_std_validation/test.cwl Branch/Commit ID: e77d435a1e569d5bbcb20c046632ccf93be004a7 |
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wf-variantcall.cwl
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https://github.com/bcbio/bcbio_validation_workflows.git
Path: NA12878-chr20/NA12878-platinum-chr20-workflow/wf-variantcall.cwl Branch/Commit ID: 9606af30d5f047745a1cd7ec1a59d65508ed256e |
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PGAP Pipeline
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https://github.com/ncbi-gpipe/pgap.git
Path: progs/unit_tests/test_collect_annot_stats/test.cwl Branch/Commit ID: 8dcf1cc79ea26e9fec999e77ceae1aebfff2cff6 |
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main-giab-chm.cwl
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https://github.com/bcbio/bcbio_validation_workflows.git
Path: giab-chm/giab-chm-workflow/main-giab-chm.cwl Branch/Commit ID: 9606af30d5f047745a1cd7ec1a59d65508ed256e |
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tt_hmmsearch_wnode.cwl
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https://github.com/ncbi-gpipe/pgap.git
Path: task_types/tt_hmmsearch_wnode.cwl Branch/Commit ID: 0932e4d778ea981cdc19702eab7fc8d572fe8216 |
