Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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chksum_seqval_wf_interleaved_fq.cwl
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https://github.com/cancerit/workflow-seq-import.git
Path: cwls/chksum_seqval_wf_interleaved_fq.cwl Branch/Commit ID: 0.4.1 |
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star_align_workflow.cwl
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https://github.com/NCI-GDC/gdc-rnaseq-cwl.git
Path: rnaseq-star-align/subworkflows/rnaseq_processing/star_align_workflow.cwl Branch/Commit ID: master |
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Functional analyis of sequences that match the 16S SSU
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/16S_taxonomic_analysis.cwl Branch/Commit ID: ca6ca61 |
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rRNA annotation workflow with scatter processing
\"This workflow performs rRNA annotation processing for multiple index files using scatter. It executes 4 processes: makeblastdb, blastn alignment, filtering, and rRNA removal for each rRNA index file. related CWL file: ./Tools/09_makeblastdb_rRNA.cwl ./Tools/10_blastn_rRNA_alignment.cwl ./Tools/10_blastn_rRNA_filter1.cwl ./Tools/10_blastn_rRNA_filter2.cwl ./Tools/10_blastn_rRNA_filter3.cwl\" |
https://github.com/RyoMameda/ComplexMicrobiome_GeneExpression_CWL.git
Path: Workflow/blastn_rRNA_ssw.cwl Branch/Commit ID: main |
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extract_fraginfo.cwl
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https://github.com/kyusque/abmp_log_dump2pieda.git
Path: extract_fraginfo.cwl Branch/Commit ID: master |
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two-step-workflow.cwl
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https://github.com/BiodataAnalysisGroup/intro-to-cwl-docker.git
Path: _includes/cwl/two-step-workflow.cwl Branch/Commit ID: gh-pages |
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run-openfoam.cwl
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https://github.com/chgarth/cwl-openfoam.git
Path: cwl/run-openfoam.cwl Branch/Commit ID: main |
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SSU-from-tablehits.cwl
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https://github.com/farahzkhan/ebi-metagenomics-cwl.git
Path: tools/SSU-from-tablehits.cwl Branch/Commit ID: master |
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04-quantification-se-revstranded.cwl
RNA-seq 04 quantification |
https://github.com/alexbarrera/GGR-cwl.git
Path: v1.0/RNA-seq_pipeline/04-quantification-se-revstranded.cwl Branch/Commit ID: master |
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adapter for sequence_align_and_tag
Some workflow engines won't stage files in our nested structure, so parse it out here |
https://github.com/litd/analysis-workflows.git
Path: definitions/subworkflows/sequence_align_and_tag_adapter.cwl Branch/Commit ID: master |
