Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Varscan Workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/varscan_pre_and_post_processing.cwl Branch/Commit ID: 97572e3a088d79f6a4166385f79e79ea77b11470
	alignment_prep.cwl	https://github.com/uc-cdis/genomel_pipelines.git Path: genomel/cwl/workflows/harmonization/alignment_prep.cwl Branch/Commit ID: 0f8f97e6173085500b688ca8c601b1ce966dce33
	collate_unique_SSU_headers.cwl	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: tools/collate_unique_SSU_headers.cwl Branch/Commit ID: 5d5a1d1b3777074c9a7114074a24b502b5667f02
	Add snv and indel bam-readcount files to a vcf	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/vcf_readcount_annotator.cwl Branch/Commit ID: 97572e3a088d79f6a4166385f79e79ea77b11470
	mutect parallel workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/mutect.cwl Branch/Commit ID: 97572e3a088d79f6a4166385f79e79ea77b11470
	pindel parallel workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel.cwl Branch/Commit ID: 97572e3a088d79f6a4166385f79e79ea77b11470
	Detect Docm variants	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/docm_cle.cwl Branch/Commit ID: 97572e3a088d79f6a4166385f79e79ea77b11470
	strelka workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/strelka_and_post_processing.cwl Branch/Commit ID: 97572e3a088d79f6a4166385f79e79ea77b11470
	Alignment without BQSR	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/sequence_to_bqsr_mouse.cwl Branch/Commit ID: 700e73aaed6db1ad538dd27b2e1709f436ad3edb
	Exome QC workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/qc_exome.cwl Branch/Commit ID: 480c438a6a7e78c624712aec01bc4214d2bc179c