Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Alignment without BQSR

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/sequence_to_bqsr_nonhuman.cwl

Branch/Commit ID: 8eb189a4a34dc8cd86380685f814c79a444a7601
workflow graph Varscan Workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/varscan_pre_and_post_processing.cwl

Branch/Commit ID: 8eb189a4a34dc8cd86380685f814c79a444a7601
workflow graph ani_top_n

https://github.com/ncbi-gpipe/pgap.git

Path: task_types/tt_ani_top_n.cwl

Branch/Commit ID: 302e0ae17b8e6776fe94b1b26f1cc47a4e84e8c8
workflow graph kmer_top_n

https://github.com/ncbi-gpipe/pgap.git

Path: task_types/tt_kmer_top_n.cwl

Branch/Commit ID: 302e0ae17b8e6776fe94b1b26f1cc47a4e84e8c8
workflow graph 02-trim-se.cwl

RNA-seq 02 trimming - reads: SE

 https://github.com/Duke-GCB/GGR-cwl.git

Path: v1.0/RNA-seq_pipeline/02-trim-se.cwl

Branch/Commit ID: 8d02684ae0ff27e641f3704686e3bc8b1979b854
workflow graph kfdrc-jointgenotyping-refinement-workflow.cwl

https://github.com/kids-first/kf-jointgenotyping-workflow.git

Path: workflow/kfdrc-jointgenotyping-refinement-workflow.cwl

Branch/Commit ID: 1909be83777f5c60ea6d2852db5cbd283fc2fa00
workflow graph Add snv and indel bam-readcount files to a vcf

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/vcf_readcount_annotator.cwl

Branch/Commit ID: 8eb189a4a34dc8cd86380685f814c79a444a7601
workflow graph validate_interleaved_fq.cwl

https://github.com/cancerit/workflow-seq-import.git

Path: cwls/validate_interleaved_fq.cwl

Branch/Commit ID: f63e0781e85d2efc0ae8900548e858813da0b53b
workflow graph mutect parallel workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/mutect.cwl

Branch/Commit ID: 8eb189a4a34dc8cd86380685f814c79a444a7601
workflow graph strelka workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/strelka_and_post_processing.cwl

Branch/Commit ID: 8eb189a4a34dc8cd86380685f814c79a444a7601