Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph star-cufflinks_wf_pe.cwl

https://github.com/pitagora-network/pitagora-cwl.git

Path: workflows/star-cufflinks/paired_end/star-cufflinks_wf_pe.cwl

Branch/Commit ID: fb189fef3ddcb0d6619f9a22b4f57b880db654c0
workflow graph salmon_wf_pe.cwl

https://github.com/pitagora-network/pitagora-cwl.git

Path: workflows/salmon/paired_end/salmon_wf_pe.cwl

Branch/Commit ID: fb189fef3ddcb0d6619f9a22b4f57b880db654c0
workflow graph Bacterial Annotation, pass 2, blastp-based functional annotation (first pass)

https://github.com/ncbi/pgap.git

Path: bacterial_annot/wf_bacterial_annot_pass2.cwl

Branch/Commit ID: b548dc1ec6cb90d14d57a813fb69430adaa1c425
workflow graph hisat2-stringtie_wf_se.cwl

https://github.com/pitagora-network/pitagora-cwl.git

Path: workflows/hisat2-stringtie/single_end/hisat2-stringtie_wf_se.cwl

Branch/Commit ID: fb189fef3ddcb0d6619f9a22b4f57b880db654c0
workflow graph salmon_wf_se.cwl

https://github.com/pitagora-network/pitagora-cwl.git

Path: workflows/salmon/single_end/salmon_wf_se.cwl

Branch/Commit ID: fb189fef3ddcb0d6619f9a22b4f57b880db654c0
workflow graph star-cufflinks_wf_se.cwl

https://github.com/pitagora-network/pitagora-cwl.git

Path: workflows/star-cufflinks/single_end/star-cufflinks_wf_se.cwl

Branch/Commit ID: fb189fef3ddcb0d6619f9a22b4f57b880db654c0
workflow graph Run genomic CMsearch (Rfam rRNA)

https://github.com/ncbi/pgap.git

Path: bacterial_ncrna/wf_gcmsearch.cwl

Branch/Commit ID: 23f0ee7a36649ab37cabdd9277b7c82d098be79c
workflow graph wf-svcall.cwl

https://github.com/bcbio/bcbio_validation_workflows.git

Path: wes-agha-test/wes_chr21_test-workflow-arvados/wf-svcall.cwl

Branch/Commit ID: a297e87e014de998b8df9c90700c29173ec09932
workflow graph Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/pvacseq.cwl

Branch/Commit ID: 0798b3933ae3e6486596294984c7ffee50b94ef5
workflow graph main-somatic.cwl

https://github.com/bcbio/test_bcbio_cwl.git

Path: somatic/somatic-workflow/main-somatic.cwl

Branch/Commit ID: d675318396ddf17fb886c058f5f17f8b0414f4cd