Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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exomeseq.cwl#exomeseq-02-variantdiscovery.cwl
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https://github.com/Duke-GCB/bespin-cwl.git
Path: packed/exomeseq.cwl Branch/Commit ID: qiime2-workflow Packed ID: exomeseq-02-variantdiscovery.cwl |
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metabarcode (gene amplicon) analysis for fastq files
protein - qc, preprocess, annotation, index, abundance |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/metabarcode-fasta.workflow.cwl Branch/Commit ID: master |
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wgs alignment and germline variant detection
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https://github.com/tmooney/cancer-genomics-workflow.git
Path: definitions/pipelines/germline_wgs.cwl Branch/Commit ID: downsample_and_recall |
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if_input_is_bz2_generate_md5sum_else_return_input_chksum_json.cwl
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https://github.com/cancerit/workflow-seq-import.git
Path: cwls/if_input_is_bz2_generate_md5sum_else_return_input_chksum_json.cwl Branch/Commit ID: 0.5.0_test |
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io-int-default-tool-and-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/io-int-default-tool-and-wf.cwl Branch/Commit ID: main |
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RNASelector as a CWL workflow
https://doi.org/10.1007/s12275-011-1213-z |
https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git
Path: workflows/rna-selector.cwl Branch/Commit ID: f993cad |
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ST520111.cwl
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https://github.com/Marco-Salvi/cwl-ro-crate.git
Path: ST520111.cwl Branch/Commit ID: main |
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collate_unique_SSU_headers.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/collate_unique_SSU_headers.cwl Branch/Commit ID: a8abd0e |
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scRNA-seq pipeline using Salmon and Alevin
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https://github.com/hubmapconsortium/salmon-rnaseq.git
Path: pipeline.cwl Branch/Commit ID: 8a00eb4 |
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merge and annotate svs with population allele freq
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https://github.com/fgomez02/analysis-workflows.git
Path: definitions/subworkflows/merge_svs.cwl Branch/Commit ID: No_filters_detect_variants |
