Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph vcf_concat.cwl

https://github.com/mskcc/ACCESS-Pipeline.git

Path: workflows/subworkflows/vcf_concat.cwl

Branch/Commit ID: master
workflow graph abundance

abundace profiles from annotated files, for protein and/or rna

 https://github.com/MG-RAST/pipeline.git

Path: CWL/Workflows/abundance.workflow.cwl

Branch/Commit ID: master
workflow graph rRNA_selection.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/rRNA_selection.cwl

Branch/Commit ID: 5e82174
workflow graph Low vaf Detect Variants workflow for Megan Cooper

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/pipelines/low_vaf_detect_variants.cwl

Branch/Commit ID: low-vaf
workflow graph collate_unique_SSU_headers.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/collate_unique_SSU_headers.cwl

Branch/Commit ID: 71d9c83
workflow graph predictions.cwl

https://github.com/simleo/workflow-run-crate.git

Path: docs/examples/draft/ml-predict-pipeline-streamflow/predictions.cwl

Branch/Commit ID: main
workflow graph qiime2 DADA2 detect/correct sequence data

Option 1: DADA2 from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/

 https://github.com/Duke-GCB/bespin-cwl.git

Path: packed/qiime2-step2-dada2.cwl

Branch/Commit ID: qiime2-workflow

Packed ID: qiime2-03-dada2.cwl
workflow graph Identifies non-coding RNAs using Rfams covariance models

https://github.com/mscheremetjew/workflow-is-cwl.git

Path: workflows/cmsearch-multimodel-wf.cwl

Branch/Commit ID: cwlexec
workflow graph blastp_wnode_naming

https://github.com/ncbi/pgap.git

Path: task_types/tt_blastp_wnode_naming.cwl

Branch/Commit ID: master
workflow graph exomeseq-gatk4-02-variantdiscovery.cwl

https://github.com/Duke-GCB/bespin-cwl.git

Path: subworkflows/exomeseq-gatk4-02-variantdiscovery.cwl

Branch/Commit ID: master