Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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align_merge_sas
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https://github.com/ncbi/pgap.git
Path: task_types/tt_align_merge_sas.cwl Branch/Commit ID: 5463361069e263ad6455858e054c1337b1d9e752 |
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taxonomy_check_16S
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https://github.com/ncbi/pgap.git
Path: task_types/tt_taxonomy_check_16S.cwl Branch/Commit ID: 9ff3e17888a15f4691ba82380472317214e20a1c |
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fp_filter workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/fp_filter.cwl Branch/Commit ID: 00df82a529a58d362158110581e1daa28b4d7ecb |
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rRNA_selection.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/rRNA_selection.cwl Branch/Commit ID: 6c856cd2d7dd1c21016341feb942ada0fb5630cb |
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blastp_wnode_struct
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https://github.com/ncbi/pgap.git
Path: task_types/tt_blastp_wnode_struct.cwl Branch/Commit ID: 3384fa5776c183d33bef830696b6edc6ec55a292 |
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Alignment without BQSR
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/sequence_to_bqsr_mouse.cwl Branch/Commit ID: 742dbafb5fb103d8578f48a0576c14dd8dae3b2a |
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umi duplex alignment fastq workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/alignment_umi_duplex.cwl Branch/Commit ID: 742dbafb5fb103d8578f48a0576c14dd8dae3b2a |
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Subworkflow to allow calling cnvkit with cram instead of bam files
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cram_to_cnvkit.cwl Branch/Commit ID: 844c10a4466ab39c02e5bfa7a210c195b8efa77a |
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umi molecular alignment workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/molecular_qc.cwl Branch/Commit ID: 04d21c33a5f2950e86db285fa0a32a6659198d8a |
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Tumor-Only Detect Variants workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/tumor_only_detect_variants.cwl Branch/Commit ID: f0cdc773e31e4aa116838e8aba4954c31bd3d68b |
