Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
---|---|---|---|
|
Filter differentially expressed genes from DESeq for Tag Density Profile Analyses
Filters differentially expressed genes from DESeq for Tag Density Profile Analyses ================================================================================== Tool filters output from DESeq pipeline run for genes to create a file with regions of interest for Tag Density Profile Analyses. |
![]() Path: workflows/filter-deseq-for-heatmap.cwl Branch/Commit ID: 4a5c59829ff8b9f3c843e66e3c675dcd9c689ed5 |
|
|
fp_filter workflow
|
![]() Path: definitions/subworkflows/fp_filter.cwl Branch/Commit ID: 43c790e2ee6a0f3f42e40fb4d9a9005eb8de747a |
|
|
cluster_blastp_wnode and gpx_qdump combined
|
![]() Path: task_types/tt_cluster_and_qdump.cwl Branch/Commit ID: 90a321ecf2d049330bcf0657cc4d764d2c3f42dd |
|
|
PCA - Principal Component Analysis
Principal Component Analysis --------------- Principal component analysis (PCA) is a statistical procedure that uses an orthogonal transformation to convert a set of observations of possibly correlated variables (entities each of which takes on various numerical values) into a set of values of linearly uncorrelated variables called principal components. The calculation is done by a singular value decomposition of the (centered and possibly scaled) data matrix, not by using eigen on the covariance matrix. This is generally the preferred method for numerical accuracy. |
![]() Path: workflows/pca.cwl Branch/Commit ID: a409db2289b86779897ff19003bd351701a81c50 |
|
|
Running cellranger count and lineage inference
|
![]() Path: definitions/subworkflows/single_cell_rnaseq.cwl Branch/Commit ID: 2e0562a5c3cd7aac24af4c622a5ae68a7fb23a71 |
|
|
indices-header.cwl
|
![]() Path: metadata/indices-header.cwl Branch/Commit ID: 433c10a6ee9f9b07f1af4141e3df6a584dfe86a1 |
|
|
kmer_ref_compare_wnode
|
![]() Path: task_types/tt_kmer_ref_compare_wnode.cwl Branch/Commit ID: f1eb0f4eaaf1661044f28d859f7e8d4302525ead |
|
|
pindel parallel workflow
|
![]() Path: definitions/subworkflows/pindel.cwl Branch/Commit ID: 77ec4f26eb14ed82481828bd9f6ef659cfd8b40f |
|
|
workflow.cwl
|
![]() Path: flow_dispatch/workflow.cwl Branch/Commit ID: 39b1d1a39a2ccdadd52db15b41422ecccc66e605 |
|
|
EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.
|
![]() Path: workflows/emg-qc-single.cwl Branch/Commit ID: b6d3aaf3fa6695061208c6cdca3d7881cc45400d |