Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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GEM peak calling
This workflow execute peak calling using GEM |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/ChIP-Seq/gem.cwl Branch/Commit ID: 33123d6a92bf0038951820d0d2c9cf501ae2ebf6 |
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Merge, annotate, and generate a TSV for SVs
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/merge_svs.cwl Branch/Commit ID: bed420556091b7b8b45cf20a95e5947e1de9a416 |
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kmer_build_tree
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https://github.com/ncbi-gpipe/pgap.git
Path: task_types/tt_kmer_build_tree.cwl Branch/Commit ID: b51e37098871db9fbb7ee0cc642df98ddbb9092b |
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kmer_compare_wnode
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https://github.com/ncbi-gpipe/pgap.git
Path: task_types/tt_kmer_compare_wnode.cwl Branch/Commit ID: b51e37098871db9fbb7ee0cc642df98ddbb9092b |
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kmer_ref_compare_wnode
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https://github.com/ncbi-gpipe/pgap.git
Path: task_types/tt_kmer_ref_compare_wnode.cwl Branch/Commit ID: 302e0ae17b8e6776fe94b1b26f1cc47a4e84e8c8 |
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format_rrnas_from_seq_entry
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https://github.com/ncbi-gpipe/pgap.git
Path: task_types/tt_format_rrnas_from_seq_entry.cwl Branch/Commit ID: b51e37098871db9fbb7ee0cc642df98ddbb9092b |
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align_merge_sas
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https://github.com/ncbi-gpipe/pgap.git
Path: task_types/tt_align_merge_sas.cwl Branch/Commit ID: b51e37098871db9fbb7ee0cc642df98ddbb9092b |
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hmmsearch_wnode and gpx_qdump combined workflow to apply scatter/gather
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https://github.com/ncbi/pgap.git
Path: task_types/tt_hmmsearch_wnode_plus_qdump.cwl Branch/Commit ID: a432f942e325da401488be454fa0f1100d9e6189 |
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extract_gencoll_ids
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https://github.com/ncbi-gpipe/pgap.git
Path: task_types/tt_extract_gencoll_ids.cwl Branch/Commit ID: 302e0ae17b8e6776fe94b1b26f1cc47a4e84e8c8 |
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CRAM_md5sum.cwl
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https://github.com/DataBiosphere/toolbox.git
Path: CRAM-no-header-md5sum/md5sum/CRAM_md5sum.cwl Branch/Commit ID: 540471878f913d672103e277180e3028c16a3027 |
