Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph process VCF workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/strelka_process_vcf.cwl

Branch/Commit ID: 4b5970dcf08bac2598e62ffd2673e67a25004c40
workflow graph upload_results.cwl

https://github.com/uc-cdis/genomel_pipelines.git

Path: genomel/cwl/workflows/utils/upload_results.cwl

Branch/Commit ID: 3657003ce9fafd0e1916914ec5bf5fd3f28aedaf
workflow graph download_fastq.cwl

https://github.com/uc-cdis/genomel_pipelines.git

Path: genomel/cwl/workflows/utils/download_fastq.cwl

Branch/Commit ID: 3657003ce9fafd0e1916914ec5bf5fd3f28aedaf
workflow graph download_check.cwl

https://github.com/uc-cdis/genomel_pipelines.git

Path: genomel/cwl/workflows/utils/download_check.cwl

Branch/Commit ID: 3657003ce9fafd0e1916914ec5bf5fd3f28aedaf
workflow graph alignment_bwa_mem_prod.cwl

https://github.com/uc-cdis/genomel_pipelines.git

Path: genomel/cwl/workflows/harmonization/alignment_bwa_mem_prod.cwl

Branch/Commit ID: 3657003ce9fafd0e1916914ec5bf5fd3f28aedaf
workflow graph harmonization_bwa_mem_prod.cwl

https://github.com/uc-cdis/genomel_pipelines.git

Path: genomel/cwl/workflows/harmonization/harmonization_bwa_mem_prod.cwl

Branch/Commit ID: 3657003ce9fafd0e1916914ec5bf5fd3f28aedaf
workflow graph scatter GATK HaplotypeCaller over intervals

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/gatk_haplotypecaller_iterator.cwl

Branch/Commit ID: 67f56d3b9c70ad56019ed8aa8d50a128e02be43b
workflow graph hisat2-cufflinks_wf_pe.cwl

https://github.com/pitagora-network/pitagora-cwl.git

Path: workflows/hisat2-cufflinks/paired_end/hisat2-cufflinks_wf_pe.cwl

Branch/Commit ID: 85c5420fad00cc6ecefb08d3be999e82d4a69bae
workflow graph Filter Protein Seeds I; Find ProSplign Alignments I

https://github.com/ncbi/pgap.git

Path: protein_alignment/wf_compart_filter_prosplign.cwl

Branch/Commit ID: 83ef15482f405bc3d24f88cbf405ceffea9b3023
workflow graph Seed Protein Alignments I

https://github.com/ncbi/pgap.git

Path: protein_alignment/wf_seed_1.cwl

Branch/Commit ID: b4a6e46405c08e0b14ad92f0ab38bcc4a69caa5c