Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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cmsearch-multimodel.cwl
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![]() Path: workflows/cmsearch-multimodel.cwl Branch/Commit ID: 930a2cf6fff820c2461b42dd79d71d9379343013 |
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Cell Ranger Count Gene Expression
Cell Ranger Count Gene Expression ================================= |
![]() Path: workflows/single-cell-preprocess-cellranger.cwl Branch/Commit ID: 1131f82a53315cca217a6c84b3bd272aa62e4bca |
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bwa_pe.cwl
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![]() Path: workflows/align/bwa_pe.cwl Branch/Commit ID: ac59a0523af18df87bfc45b26d4cb59a9e34bb7d |
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WGS QC workflow nonhuman
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![]() Path: definitions/subworkflows/qc_wgs_nonhuman.cwl Branch/Commit ID: 509938802c5e42bb8084c6a5a26ab6425c60e69a |
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SoupX (workflow) - an R package for the estimation and removal of cell free mRNA contamination
Wrapped in a workflow SoupX tool for easy access to Cell Ranger pipeline compressed outputs. |
![]() Path: tools/soupx-subworkflow.cwl Branch/Commit ID: 1131f82a53315cca217a6c84b3bd272aa62e4bca |
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any-type-compat.cwl
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![]() Path: tests/any-type-compat.cwl Branch/Commit ID: 6397014050177074c9ccd0d771577f7fa9f728a3 |
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downsample unaligned BAM and align
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![]() Path: definitions/subworkflows/downsampled_alignment.cwl Branch/Commit ID: 77ec4f26eb14ed82481828bd9f6ef659cfd8b40f |
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kmer_top_n_extract
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![]() Path: task_types/tt_kmer_top_n_extract.cwl Branch/Commit ID: 02816f0d66e36c8eeba02d211cc90e36bf1c9df5 |
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Create tagAlign file
This workflow creates tagAlign file |
![]() Path: workflows/File-formats/create-tagAlign.cwl Branch/Commit ID: e541470bc9d0b064bc4ed7dd2b45d8ec67760613 |
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pipeline.cwl
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![]() Path: pipeline.cwl Branch/Commit ID: 91d193f52a0d6c86491812da618face3d5a6ab67 |