Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	bam_readcount workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_readcount.cwl Branch/Commit ID: 77ec4f26eb14ed82481828bd9f6ef659cfd8b40f
	hmmsearch_wnode and gpx_qdump combined workflow to apply scatter/gather	https://github.com/ncbi/pgap.git Path: task_types/tt_hmmsearch_wnode_plus_qdump.cwl Branch/Commit ID: e2a6cbcc36212433d8fbc804919442787a5e2a49
	Filter single sample sv vcf from depth callers(cnvkit/cnvnator)	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/sv_depth_caller_filter.cwl Branch/Commit ID: da335d9963418f7bedd84cb2791a0df1b3165ffe
	exome alignment and somatic variant detection for cle purpose	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/somatic_exome_cle.cwl Branch/Commit ID: 93656ed6582073e434eab168c610625a835dce37
	workflow.cwl	https://github.com/NAL-i5K/Organism_Onboarding.git Path: flow_download/workflow.cwl Branch/Commit ID: 0b58c250e8ab7c5efae29443f08ea74316127041
	foreign_screening.cwl	https://github.com/ncbi/pgap.git Path: vecscreen/foreign_screening.cwl Branch/Commit ID: e2a6cbcc36212433d8fbc804919442787a5e2a49
	Whole genome alignment and somatic variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/somatic_wgs.cwl Branch/Commit ID: 43c790e2ee6a0f3f42e40fb4d9a9005eb8de747a
	umi duplex alignment workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/duplex_alignment.cwl Branch/Commit ID: 2e0562a5c3cd7aac24af4c622a5ae68a7fb23a71
	scatter2.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/scatter2.cwl Branch/Commit ID: 445f6b3a214f0c48317b25f7af278ae919ce5403
	kmer_cache_retrieve	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_cache_retrieve.cwl Branch/Commit ID: 75ea689c0a8c9902b4598b453455857cb08e885a