Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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wgs alignment with qc
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![]() Path: definitions/pipelines/alignment_wgs.cwl Branch/Commit ID: eb0092603bf57acb7bda08a06e4f2f1e2a8c9b6d |
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Running cellranger count and lineage inference
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![]() Path: definitions/subworkflows/single_cell_rnaseq.cwl Branch/Commit ID: 27dcb1ae121be6a23057b74332b8c752ea425735 |
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exome alignment and somatic variant detection for cle purpose
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![]() Path: definitions/pipelines/somatic_exome_cle.cwl Branch/Commit ID: eb0092603bf57acb7bda08a06e4f2f1e2a8c9b6d |
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Raw sequence data to BQSR
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![]() Path: definitions/subworkflows/sequence_to_bqsr.cwl Branch/Commit ID: 27dcb1ae121be6a23057b74332b8c752ea425735 |
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Immunotherapy Workflow
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![]() Path: definitions/pipelines/immuno.cwl Branch/Commit ID: 8eb189a4a34dc8cd86380685f814c79a444a7601 |
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Apply filters to VCF file
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![]() Path: definitions/subworkflows/filter_vcf_mouse.cwl Branch/Commit ID: 27dcb1ae121be6a23057b74332b8c752ea425735 |
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io-int-default-tool-and-wf.cwl
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![]() Path: v1.0/v1.0/io-int-default-tool-and-wf.cwl Branch/Commit ID: f24c797ea017a467185b516ea4862c9c494c9d33 |
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Detect DoCM variants
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![]() Path: definitions/subworkflows/docm_germline.cwl Branch/Commit ID: 27dcb1ae121be6a23057b74332b8c752ea425735 |
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format_rrnas_from_seq_entry
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![]() Path: task_types/tt_format_rrnas_from_seq_entry.cwl Branch/Commit ID: 41dfc42a730087189122a2f74b2f547a4665a225 |
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Transcripts annotation workflow
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![]() Path: workflows/TranscriptsAnnotation-i5only-wf.cwl Branch/Commit ID: c9c8f352e19ad7043bd242f6f6df2829b93e0a6f |