Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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functional analysis prediction with InterProScan
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/functional_analysis.cwl Branch/Commit ID: 8515542 |
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bam_filtering
BAM filtering |
https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/cwl/subworkflows/bam_filtering.cwl Branch/Commit ID: 1.0.5 |
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rnaseq-pe.cwl
Runs RNA-Seq BioWardrobe basic analysis with pair-end data file. |
https://github.com/Barski-lab/workflows.git
Path: workflows/rnaseq-pe.cwl Branch/Commit ID: master |
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snps_and_indels.cwl
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https://github.com/mskcc/ACCESS-Pipeline.git
Path: workflows/subworkflows/snps_and_indels.cwl Branch/Commit ID: master |
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taxcheck.cwl
Perform taxonomic identification tasks on an input genome |
https://github.com/ncbi/pgap.git
Path: taxcheck.cwl Branch/Commit ID: test |
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WGS and MT analysis for fastq files
rna / protein - qc, preprocess, filter, annotation, index, abundance |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/wgs-noscreen-fasta.workflow.cwl Branch/Commit ID: master |
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SSU-from-tablehits.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/SSU-from-tablehits.cwl Branch/Commit ID: 71d9c83 |
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Functional analyis of sequences that match the 16S SSU
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/16S_taxonomic_analysis.cwl Branch/Commit ID: 5833078 |
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GSC Paired Jobs
Serial combination of KnowEnG tools |
https://github.com/knoweng-research/cwl-specification.git
Path: code/workflow.gsc.cwl Branch/Commit ID: master |
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umi per-lane alignment subworkflow
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https://github.com/apaul7/cancer-genomics-workflow.git
Path: definitions/subworkflows/umi_alignment.cwl Branch/Commit ID: low-vaf |
