Explore Workflows
View already parsed workflows here or click here to add your own
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stage_data_workflow.vcf_to_aliquot_maf.cwl
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Path: vcf-to-aliquot-maf/subworkflows/stage_data_workflow.vcf_to_aliquot_maf.cwl Branch/Commit ID: main |
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count-lines11-extra-step-wf.cwl
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Path: tests/count-lines11-extra-step-wf.cwl Branch/Commit ID: master |
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cond-wf-004_nojs.cwl
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Path: tests/conditionals/cond-wf-004_nojs.cwl Branch/Commit ID: main |
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Ambarish_Kumar_SOP-GATK-SAR-CoV-2.cwl
Author: AMBARISH KUMAR er.ambarish@gmail.com & ambari73_sit@jnu.ac.in This is a proposed standard operating procedure for genomic variant detection using GATK4. It is hoped to be effective and useful for getting SARS-CoV-2 genome variants. It uses Illumina RNASEQ reads and genome sequence. |
Path: Ambarish_Kumar_SOP/CWL/Ambarish_Kumar_SOP-GATK-SAR-CoV-2.cwl Branch/Commit ID: main |
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word-mapping-test-files-wf.cwl#align-texts-wf.cwl
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Path: ochre/cwl/word-mapping-test-files-wf.cwl Branch/Commit ID: master Packed ID: align-texts-wf.cwl |
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SPRM pipeline
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Path: pipeline.cwl Branch/Commit ID: d42d6f5 |
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fileSizer.cwl
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Path: steps/fileSizer.cwl Branch/Commit ID: master |
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qc_aggregator
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Path: access_qc__packed.cwl Branch/Commit ID: develop Packed ID: qc_aggregator.cwl |
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cmsearch-multimodel.cwl
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Path: workflows/cmsearch-multimodel.cwl Branch/Commit ID: 71d9c83 |
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oxog_sub_wf.cwl
This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow! |
Path: oxog_sub_wf.cwl Branch/Commit ID: master |
