Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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HS Metrics workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/hs_metrics.cwl Branch/Commit ID: 87faba2fff8007ecc95160729b1c7cd0376e46f2 |
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metrics.cwl
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https://github.com/NCI-GDC/gdc-mirnaseq-cwl.git
Path: workflows/mirnaseq_automation/metrics.cwl Branch/Commit ID: 963f6d502da2c4f152c1654e94008ccf8f6d0db3 |
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readgroups_bam_to_readgroups_fastq_lists.cwl
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https://github.com/NCI-GDC/gdc-mirnaseq-cwl.git
Path: workflows/mirnaseq_automation/readgroups_bam_to_readgroups_fastq_lists.cwl Branch/Commit ID: 963f6d502da2c4f152c1654e94008ccf8f6d0db3 |
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createindex.cwl
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https://github.com/yyoshiaki/VIRTUS.git
Path: workflow/createindex.cwl Branch/Commit ID: ff8ca6c87ad2c8fa2d1bc9a8bb4bca9c523826d6 |
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test-data.cwl
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https://github.com/kyusque/abmp_log_dump2pieda.git
Path: test-data.cwl Branch/Commit ID: a14639e46149b1a248731c3d339f037c413940a8 |
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Subworkflow that runs cnvkit in single sample mode and returns a vcf file
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cnvkit_single_sample.cwl Branch/Commit ID: 87faba2fff8007ecc95160729b1c7cd0376e46f2 |
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rRNA_selection.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/rRNA_selection.cwl Branch/Commit ID: 0fed1c959ab33112eae46fb02fceffa8bb26b811 |
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Filter single sample sv vcf from paired read callers(Manta/Smoove)
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/sv_paired_read_caller_filter.cwl Branch/Commit ID: 87faba2fff8007ecc95160729b1c7cd0376e46f2 |
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Merge, annotate, and generate a TSV for SVs
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/merge_svs.cwl Branch/Commit ID: 87faba2fff8007ecc95160729b1c7cd0376e46f2 |
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Filter single sample sv vcf from depth callers(cnvkit/cnvnator)
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/sv_depth_caller_filter.cwl Branch/Commit ID: 87faba2fff8007ecc95160729b1c7cd0376e46f2 |
