Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph CRAM_md5sum_checker_wrapper.cwl

This wraps the md5sum tool with a checker workflow that runs both the tool and a tool that performs verification of results

https://github.com/DataBiosphere/topmed-workflows.git

Path: CRAM-no-header-md5sum/CRAM_md5sum_checker_wrapper.cwl

Branch/Commit ID: de5e708a67fd326bc00c0ee280eec2a29b004a0f
workflow graph xenbase-rnaseq-se.cwl

XenBase workflow for analysing RNA-Seq single-end data

https://github.com/datirium/workflows.git

Path: workflows/xenbase-rnaseq-se.cwl

Branch/Commit ID: e284e3f6dff25037b209895c52f2abd37a1ce1bf
workflow graph Transcripts annotation workflow

https://github.com/mscheremetjew/workflow-is-cwl.git

Path: workflows/TranscriptsAnnotation-wf.cwl

Branch/Commit ID: 607a9f9dce5d066307de59796ba22e0054789bcb
workflow graph trim-chipseq-se.cwl

ChIP-Seq basic analysis workflow for a single-read experiment with Trim Galore.

https://github.com/datirium/workflows.git

Path: workflows/trim-chipseq-se.cwl

Branch/Commit ID: e284e3f6dff25037b209895c52f2abd37a1ce1bf
workflow graph chipseq-se.cwl

ChIP-Seq basic analysis workflow for a single-read experiment.

https://github.com/datirium/workflows.git

Path: workflows/chipseq-se.cwl

Branch/Commit ID: e284e3f6dff25037b209895c52f2abd37a1ce1bf
workflow graph Transcripts annotation workflow

https://github.com/mscheremetjew/workflow-is-cwl.git

Path: workflows/TranscriptsAnnotation-wf.cwl

Branch/Commit ID: 1c3decb2ccbf880909e7465f38868b2fcdf66001
workflow graph l7g-build-human_g1k_v37-tile-assembly.cwl

https://github.com/curoverse/l7g.git

Path: cwl-version/experimental/l7g-tile-assembly/tile-assembly-human_g1k_v37/l7g-build-human_g1k_v37-tile-assembly.cwl

Branch/Commit ID: 2b35e13b565ee799a1c03db3237f459568822f66
workflow graph xenbase-sra-to-fastq-pe.cwl

https://github.com/datirium/workflows.git

Path: subworkflows/xenbase-sra-to-fastq-pe.cwl

Branch/Commit ID: e284e3f6dff25037b209895c52f2abd37a1ce1bf
workflow graph xenbase-fastq-bowtie-bigwig-se-pe.cwl

https://github.com/datirium/workflows.git

Path: subworkflows/xenbase-fastq-bowtie-bigwig-se-pe.cwl

Branch/Commit ID: e284e3f6dff25037b209895c52f2abd37a1ce1bf
workflow graph l7g-liftover.cwl

https://github.com/curoverse/l7g.git

Path: cwl-version/experimental/l7g-tile-assembly/tile-assembly-hg19/l7g-liftover.cwl

Branch/Commit ID: 2b35e13b565ee799a1c03db3237f459568822f66