Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph collect_feature_and_variant_counts_workflow.cwl

https://github.com/rdocking/sgseq_cwl.git

Path: cwl/collect_feature_and_variant_counts_workflow.cwl

Branch/Commit ID: 1b96beda80640ca21c2f4fcd317f890be7fa9c5e
workflow graph hi-c-processing-pairs.cwl

https://github.com/4dn-dcic/pipelines-cwl.git

Path: cwl_awsem_v1/hi-c-processing-pairs.cwl

Branch/Commit ID: 91d67820264c8ebac829174cb1d0c7c5e30c613f
workflow graph wf_demultiplex_se.cwl

This workflow takes in single-end reads, and performs the following steps in order: demux_se.cwl (does not actually demux for single end, but mirrors the paired-end processing protocol)

https://github.com/YeoLab/eclip.git

Path: cwl/wf_demultiplex_se.cwl

Branch/Commit ID: 768f21a16794479b36af28bdf4fb00971afa6192
workflow graph Unaligned to aligned BAM

https://github.com/markrobbo/workflows.git

Path: workflows/hello/exome_alignment_packed.cwl

Branch/Commit ID: 0ae2468ab2ba0b9a196c2aa89b580555750bf0f6

Packed ID: align.cwl
workflow graph bgzip and index VCF

https://github.com/mnneveau/cancer-genomics-workflow.git

Path: varscan/bgzip_and_index.cwl

Branch/Commit ID: 5a67e91727c8eb44afff27f9e4774eafef579c58
workflow graph qc-basic.workflow.cwl

https://github.com/MG-RAST/pipeline.git

Path: CWL/Workflows/qc-basic.workflow.cwl

Branch/Commit ID: 932da3abed7166bd5a962871386ba2c31d47b85c
workflow graph varscan somatic workflow

https://github.com/mnneveau/cancer-genomics-workflow.git

Path: varscan/varscan.cwl

Branch/Commit ID: 5a67e91727c8eb44afff27f9e4774eafef579c58
workflow graph scatterfail.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/scatterfail.cwl

Branch/Commit ID: 639229b1159cf484e70e52da10194561b3fad719
workflow graph cmsearch-multimodel.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/cmsearch-multimodel.cwl

Branch/Commit ID: 886df9de6713e06228d2560c40f451155a196383
workflow graph per_cluster_workflow.cwl

https://github.com/EvolutionaryGenomics/scalability-reproducibility-chapter.git

Path: CWL/per_cluster_workflow.cwl

Branch/Commit ID: 639b2bd5bed4c530a1c2b79d0789c43539dfc2c2