Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph revsort-single-no-docker.cwl

Reverse the lines in a document, then sort those lines.

https://github.com/Duke-GCB/calrissian.git

Path: input-data/revsort-single-no-docker.cwl

Branch/Commit ID: 0d2fb1751fcd45ee6233f9f78edc3aeccbfc9254

workflow graph fail-wf.cwl

Run failtool which will fail

https://github.com/Duke-GCB/calrissian.git

Path: input-data/fail-wf.cwl

Branch/Commit ID: 0d2fb1751fcd45ee6233f9f78edc3aeccbfc9254

workflow graph bwa_pe.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/bwa_pe.cwl

Branch/Commit ID: 1046947f8d2923e6563b3aceac9e435554c5bea1

workflow graph Detect Docm variants

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/docm_cle.cwl

Branch/Commit ID: 87faba2fff8007ecc95160729b1c7cd0376e46f2

workflow graph fastq_clean_se.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/fastq_clean_se.cwl

Branch/Commit ID: 1046947f8d2923e6563b3aceac9e435554c5bea1

workflow graph readgroups_bam_to_readgroups_fastq_lists.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/readgroups_bam_to_readgroups_fastq_lists.cwl

Branch/Commit ID: 1046947f8d2923e6563b3aceac9e435554c5bea1

workflow graph Apply filters to VCF file

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/filter_vcf.cwl

Branch/Commit ID: 87faba2fff8007ecc95160729b1c7cd0376e46f2

workflow graph EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-qc-paired.cwl

Branch/Commit ID: 1b0851e6456ccb1fca237a805ff85c53bc9d58c9

workflow graph workflow.cwl

https://github.com/NAL-i5K/Organism_Onboarding.git

Path: flow_dispatch/2other_species/workflow.cwl

Branch/Commit ID: 7198756b4b1519d102178042924671bd677e9b17

workflow graph mutect parallel workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/mutect.cwl

Branch/Commit ID: 87faba2fff8007ecc95160729b1c7cd0376e46f2