Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph PGAP Pipeline

PGAP pipeline for external usage, powered via containers

 https://github.com/ncbi/pgap.git

Path: wf_common.cwl

Branch/Commit ID: b4a6e46405c08e0b14ad92f0ab38bcc4a69caa5c
workflow graph cram_to_bam workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/cram_to_bam_and_index.cwl

Branch/Commit ID: 72e0bdc1ec449d86df4534132e9a30ad7e9b8afd
workflow graph 1st-workflow.cwl

https://github.com/common-workflow-language/user_guide.git

Path: _includes/cwl/22-nested-workflows/1st-workflow.cwl

Branch/Commit ID: 06a44bea01af4dedded36bd422260574c7b28c9b
workflow graph gethoge-and-pigz.cwl

https://github.com/dbcls/AOE.git

Path: gethoge-and-pigz.cwl

Branch/Commit ID: 573715ad33183cab17d79fa7e5e5aa8ae93bc138
workflow graph bwa_se.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/bwa_se.cwl

Branch/Commit ID: 017c7572ea309c7d5b34bcc9bc1bdafbe47cb515
workflow graph Unaligned to aligned BAM

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/align.cwl

Branch/Commit ID: 4b5970dcf08bac2598e62ffd2673e67a25004c40
workflow graph HS Metrics workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/hs_metrics.cwl

Branch/Commit ID: 4b5970dcf08bac2598e62ffd2673e67a25004c40
workflow graph Run tRNAScan

https://github.com/ncbi/pgap.git

Path: bacterial_trna/wf_trnascan.cwl

Branch/Commit ID: 2c7879b47890b9300ab9b5ebd35e17372e077757
workflow graph cram_to_bam workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/cram_to_bam_and_index.cwl

Branch/Commit ID: 4b5970dcf08bac2598e62ffd2673e67a25004c40
workflow graph spurious_annot pass2

https://github.com/ncbi/pgap.git

Path: spurious_annot/wf_spurious_annot_pass2.cwl

Branch/Commit ID: 2c7879b47890b9300ab9b5ebd35e17372e077757