Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph WF5201.cwl

https://github.com/Marco-Salvi/cwl-ro-crate.git

Path: WF5201.cwl

Branch/Commit ID: main
workflow graph output-arrays-int-wf.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/output-arrays-int-wf.cwl

Branch/Commit ID: master
workflow graph fastq2fasta.cwl

https://github.com/arvados/bh20-seq-resource.git

Path: workflows/fastq2fasta/fastq2fasta.cwl

Branch/Commit ID: master
workflow graph oxog_sub_wf.cwl

This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow!

https://github.com/ICGC-TCGA-PanCancer/OxoG-Dockstore-Tools.git

Path: oxog_sub_wf.cwl

Branch/Commit ID: master
workflow graph cgpRna_workflow.cwl

https://github.com/cancerit/cgpRna.git

Path: cwls/cgpRna_workflow.cwl

Branch/Commit ID: dev
workflow graph Raw sequence data to BQSR

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/subworkflows/sequence_to_bqsr.cwl

Branch/Commit ID: downsample_and_recall
workflow graph samtools_view_sam2bam

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/cwl/subworkflows/samtools_view_sam2bam.cwl

Branch/Commit ID: 1.0.6
workflow graph exome alignment and somatic variant detection for cle purpose

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/pipelines/somatic_exome_cle.cwl

Branch/Commit ID: downsample_and_recall
workflow graph multiome pipeline using Salmon and Alevin (HuBMAP scRNA-seq pipeline) and HuBMAP scATAC-seq pipeline

https://github.com/hubmapconsortium/multiome-rna-atac-pipeline.git

Path: pipeline.cwl

Branch/Commit ID: ff6c5c7
workflow graph pipeline.cwl

https://github.com/hubmapconsortium/pan-organ-azimuth-annotate.git

Path: pipeline.cwl

Branch/Commit ID: 8d83a9c