Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	SSU-from-tablehits.cwl	https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git Path: tools/SSU-from-tablehits.cwl Branch/Commit ID: 3f85843d4a6debdabe96bc800bf2a4efdcda1ef3
	Merge, annotate, and generate a TSV for SVs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/merge_svs.cwl Branch/Commit ID: 061d3a2fbcd8a1c39c0b38c549e528deb24a9d54
	collate_unique_SSU_headers.cwl	https://github.com/proteinswebteam/ebi-metagenomics-cwl.git Path: tools/collate_unique_SSU_headers.cwl Branch/Commit ID: 316831663e84623eb0e3a260af252fef441924d4
	workflow.cwl	https://github.com/nal-i5k/organism_onboarding.git Path: flow_md5checksums/workflow.cwl Branch/Commit ID: 89cff9f0d36a23bf57b3f4bdbd3ed57e3347c945
	EMG core analysis	https://github.com/proteinswebteam/ebi-metagenomics-cwl.git Path: workflows/emg-core-analysis-v4.cwl Branch/Commit ID: ecf044f3a5a7589cb2238487a19f22863c2bcdb1
	heatmap-prepare.cwl Workflow runs homer-make-tag-directory.cwl tool using scatter for the following inputs - bam_file - fragment_size - total_reads `dotproduct` is used as a `scatterMethod`, so one element will be taken from each array to construct each job: 1) bam_file[0] fragment_size[0] total_reads[0] 2) bam_file[1] fragment_size[1] total_reads[1] ... N) bam_file[N] fragment_size[N] total_reads[N] `bam_file`, `fragment_size` and `total_reads` arrays should have the identical order.	https://github.com/datirium/workflows.git Path: tools/heatmap-prepare.cwl Branch/Commit ID: b1a5dabeeeb9079b30b2871edd9c9034a1e00c1c
	phase VCF	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/phase_vcf.cwl Branch/Commit ID: bcc6adaf15035f5ce6fc851e27b1173b0fd20c1c
	collate_unique_SSU_headers.cwl	https://github.com/proteinswebteam/ebi-metagenomics-cwl.git Path: tools/collate_unique_SSU_headers.cwl Branch/Commit ID: 71d9c83761ea301a895dd669902979ef5a4b279b
	WGS processing workflow scattered over samples	https://github.com/arvados/arvados-tutorial.git Path: WGS-processing/cwl/wgs-processing-wf.cwl Branch/Commit ID: ef89d0aabd706c59168537f69742e570373fdd84
	EMG assembly for paired end Illumina	https://github.com/proteinswebteam/ebi-metagenomics-cwl.git Path: workflows/emg-pipeline-v4-assembly-metaSPAdes.cwl Branch/Commit ID: ecf044f3a5a7589cb2238487a19f22863c2bcdb1