Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Non-Coding Bacterial Genes

https://github.com/ncbi/pgap.git

Path: bacterial_noncoding/wf_bacterial_noncoding.cwl

Branch/Commit ID: dd53e6d71282b0619ef7123ba2d258b30aef2dd0
workflow graph wgetkegg_wf.cwl

https://github.com/manabuishii/wgetkegg.git

Path: wgetkegg_wf.cwl

Branch/Commit ID: master
workflow graph Run genomic CMsearch (Rfam rRNA)

https://github.com/ncbi/pgap.git

Path: bacterial_ncrna/wf_gcmsearch.cwl

Branch/Commit ID: dd53e6d71282b0619ef7123ba2d258b30aef2dd0
workflow graph nestedworkflows.cwl

https://github.com/common-workflow-language/user_guide.git

Path: src/_includes/cwl/workflows/nestedworkflows.cwl

Branch/Commit ID: main
workflow graph Salmon quantification, FASTQ -> H5AD count matrix

https://github.com/hubmapconsortium/salmon-rnaseq.git

Path: steps/salmon-quantification.cwl

Branch/Commit ID: 16dd8ca
workflow graph workflow_simple.cwl

https://github.com/FarahZKhan/scalability-reproducibility-chapter.git

Path: CWL/workflow_simple.cwl

Branch/Commit ID: ProvCaptureDemo
workflow graph msi_workflow.cwl

Workflow to run the MSI analysis on a batch of samples

https://github.com/mskcc/pluto-cwl.git

Path: cwl/msi_workflow.cwl

Branch/Commit ID: master
workflow graph Detect DoCM variants

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/docm_germline.cwl

Branch/Commit ID: master
workflow graph Running cellranger count and lineage inference

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/single_cell_rnaseq.cwl

Branch/Commit ID: master
workflow graph atac_encode_samples.cwl

https://github.com/ngs-mstb/micgent.git

Path: python/lib/MICGENT/data/cwl/atac_encode_samples.cwl

Branch/Commit ID: master