Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph protein_extract

https://github.com/ncbi/pgap.git

Path: progs/protein_extract.cwl

Branch/Commit ID: 7c8eb4d23c3c9859f57421643710c0b6d57b606c

workflow graph exome alignment with qc, no bqsr, no verify_bam_id

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/alignment_exome_mouse.cwl

Branch/Commit ID: 3bb0693076adc1543079a6b136c74906ad546ac6

workflow graph test-workflow.cwl

https://github.com/pjotrp/CWL-workflows.git

Path: Workflows/test-workflow.cwl

Branch/Commit ID: c8e66c53a76ee62c541eb98cb2cfedeba6dd5b9a

workflow graph bam to trimmed fastqs and HISAT alignments

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/bam_to_trimmed_fastq_and_hisat_alignments.cwl

Branch/Commit ID: e8b7759826df40b8bb821b40b15aea960a4951c4

workflow graph format_rrnas_from_seq_entry

https://github.com/ncbi-gpipe/pgap.git

Path: task_types/tt_format_rrnas_from_seq_entry.cwl

Branch/Commit ID: 71e3a42eadc007b66ef4689086530dfc3123d32f

workflow graph Non-Coding Bacterial Genes

https://github.com/ncbi-gpipe/pgap.git

Path: bacterial_noncoding/wf_bacterial_noncoding.cwl

Branch/Commit ID: ba3e313e646f1dd3da3f5f93a1e6cb7f252be97b

workflow graph umi molecular alignment workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/molecular_alignment.cwl

Branch/Commit ID: 67f56d3b9c70ad56019ed8aa8d50a128e02be43b

workflow graph WGS QC workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/qc_wgs.cwl

Branch/Commit ID: 3bb0693076adc1543079a6b136c74906ad546ac6

workflow graph phase VCF

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/phase_vcf.cwl

Branch/Commit ID: 0c4855bf23622828413ecb09dd30754691c28014

workflow graph 04-quantification-se-revstranded.cwl

RNA-seq 04 quantification

https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/RNA-seq_pipeline/04-quantification-se-revstranded.cwl

Branch/Commit ID: 4e568335133405d28f4b73ae11e7f51f2900dfa3