Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph ATACseq.cwl

https://github.com/CompEpigen/ATACseq_workflows.git

Path: CWL/workflows/ATACseq.cwl

Branch/Commit ID: da07ef9c506ba921438df0bc9f6e1ee57b7d5910

workflow graph Identifies non-coding RNAs using Rfams covariance models

https://github.com/mscheremetjew/workflow-is-cwl.git

Path: workflows/cmsearch-multimodel-wf.cwl

Branch/Commit ID: 55fad182885822a2927bba6bf9cd517e60d9330e

workflow graph align_sort_sa

https://github.com/ncbi-gpipe/pgap.git

Path: task_types/tt_align_sort_sa.cwl

Branch/Commit ID: 71e3a42eadc007b66ef4689086530dfc3123d32f

workflow graph exome alignment and somatic variant detection for cle purpose

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/somatic_exome_cle.cwl

Branch/Commit ID: 3bb0693076adc1543079a6b136c74906ad546ac6

workflow graph Running cellranger count and lineage inference

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/single_cell_rnaseq.cwl

Branch/Commit ID: c625e05eefb1754353c1bdfa46c01dc61e6233dd

workflow graph bam to trimmed fastqs and biscuit alignments

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/bam_to_trimmed_fastq_and_biscuit_alignments.cwl

Branch/Commit ID: cfdcd0735e8fb1ac0b97f1a5cbe0cc7e00033dd0

workflow graph tt_hmmsearch_wnode.cwl

https://github.com/ncbi/pgap.git

Path: task_types/tt_hmmsearch_wnode.cwl

Branch/Commit ID: 47ccbd0bc7b45bf8b3c92d0a66c1a9a232367a5d

workflow graph if_input_is_bz2_generate_md5sum_else_return_input_chksum_json.cwl

https://github.com/cancerit/workflow-seq-import.git

Path: cwls/toolkit/if_input_is_bz2_generate_md5sum_else_return_input_chksum_json.cwl

Branch/Commit ID: 18c71d8f76c36efbd60e07cfcde3b4f0db9d954e

workflow graph wgs_variant_calling_bam.cwl

https://github.com/cr-ste-justine/chujs-alignment-workflow.git

Path: workflows/wgs_variant_calling_bam.cwl

Branch/Commit ID: c8255e2aab840f671d9f142d74f915c76415ff51

workflow graph Running cellranger count and lineage inference

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/single_cell_rnaseq.cwl

Branch/Commit ID: ac87e0584685fe04e4010ecd77ae4f055f21d788